Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00770 ATGGCCCTCAGCGACTTCTTCGCCGGCGAGATCGCAACGGAGCTTCTCAAAATGCTCATCAGCATCTCCCGGAAGTCGCTCCTCTGCCGGGCCAGCGCCGACCAACTCATCACCTACATCCACGAGCTCCTCCCCACCATCGAGGAGATAAAGTACTCCGGCGTCGAGCTCCCCGCCCTGCGCCAGTCCCAGCTCCACCTTCTCTCGGAGATTCTCCGGTCCGGCGTGGAGCTCTCCCACAAGGTCCTGGCCTCCAGCCGTTGGAACGTTTACCGCAACCTCCACCTCGCCAAGAAGATGGACAAGCTCGAGAAGACCGTTTCGAAGTTCCTCCTCGGCCCCATGCAGGCCCACATCATGGCCGACGTCCACCACACGCGCTTCGAGATGGCGGAGCGCTTCGACCGCGTTGACAACTCCGTCCGCCGCCTCGAGCAGTACTTCGGGAACATTAAGATTGGTGTCGGCGGCGGCGGCTGGGTTGAGGAGGCTGTCAGGAGCGTGGATGAGAATGTTGTTGAAGGAAGCTCCGCCGTGGGGTTGGAATTCGGGAAGATTAAGGTAAGGGAGATGATTATCGGGAGGGAGGATCTCTGGGTTGTCGGGATTTCTGGGATTGGCGGCTCCGGGAAGACCACTCTTGCTAGAGAGGTCTGCAAAGATGACCAAGTTAGACGTTATTTCAGGGAGAGGATTTTGTTCCTGACTGTGTCGCAGTCTCCAAACGTGGAGCAACTAAGAACGAAGATTTGGGGGTACATTATGGGAAATGAGAGATTGGATTCGAACTATGTGGTTCCACAGTGGGTGCCACAGTTTGAGTGCAAAAGTGAAGCAGCTCGAACTCTGATTGTTTTGGATGATTTGTGGACATTCTCTGTGATGGAGCAGCTTGTGTGCAGAATACCTGGTTGCAAGTATCTTGTGGTGTCCAGAACTAAATTCCAAACGGTGTTGAATTATGAAGTGGAATTGCTGAGTGAAGAAGATGCCTTGTCTTTGTTCTGTCACCATGCTTTTGGACAGAAATCAATCCCTTTAGGTGCTAATGAGAATTTGGCGAAGCAGGTTGTCACTGAGTGTGGAAGGCTTCCTTTGGCTCTTAAGGTGATTGGAGCTTCTTTGCGAGATCAACCTGAGATGTTTTGGTTAAGTGTTAAAAACAGGTTATCTCAAGGTCAAAGCATTGGAGAATCCCACGAAATCAATCTGATTGAAAGAATGGAAATCAGTATCAATTACCTTCCAGAAAAAGTCAAGGAATGTTTTTTGGACCTGTGTTCATTTCCTGAGGATAAAAAGATCCCTTTGGATGTACTCATCAACATGTGGGTGGAAATCCATGATATTCCTGAAACAGAAGCTTATGCCATTGTTGTTGAACTCTCCAACAAAAATCTTCTCACCTTAATGAAAGAACCTCGTGCCGGAGGCATGTATAGCAGTTGCTTTGAGATATCAGTTACTCAACATGATATACTGAGAAACCTAGCCATTAATCTGAGCAACCGTGCTAGCATTAATGAACGCCGGCGATTAGTAATGCCAAAAAGAGAAAATGCAATTCCTAAAGAGTGGTTGAGATACAAGCACAAGCCATTTGAGGCTCAGATTGTTTCAATTCATACAGGTGAAATGAAAGATGTGGACTGGTGTAATATGGAATTTCCAAAGACAGAAGTTTTGATCATTAATTTCACATCCACTGAGTACTTCTTACCTCTCTTCATCAACACAATGCCAAATTTGAGAGCACTGATAATAATAAACTACAGTGCAACATATGCTTGCCTTCACAACATTTCAGTTTTCAAGAACTTACCCAACTTGAGGAGCCTCTGGCTTGAAAAAGTTTCCACCCCAGAATTATCTGGCACTGTGTTGGAAAACTTGGGAAAACTATTTATTGTCCTCTGCAAGATTAACAACAGATTGGTTGAAAAAGAGGTAGATATAGCCAAAGTCTTCCCAAATCTCTTTGACCTCACTCTTGATCATTGTGATGATCTAACCCAGTTGCCCTCAAGCATCTGTGGAATGAAATCACTTCAAAACTTGAGTCTCACCAACTGCCACAATCTGACTCAATTACCTCTTGAACTGGGGAAACTAAAATCTCTAGAGATTCTTCGTTTATATGCTTGTCCTGATCTGAAAACACTGCCTAATAGCATATGTGAGATGATGAGATTGAAGTATATTGATATTTCTCAATGTGTGAACCTGACATGCTTCCCTGAAGAAATTGGTAGACTGGTGAGCTTGGAGAAGATTGACATGAGGGAATGTTCCATGATCAGAAATGTACCAAAGTCTGCATTGTCATTGCAGTCTCTGCGACTTGTAATTTGTGACGAAGAGCTATCTGGGATTTGGAAAGAGGTTGAGAAGGCCAAGCCTAATGTACACATTCAAGTATCAGAGCAGCACTTTGACTTGGACTGGCTTAAAGAATGA 2457 0.4571 MALSDFFAGEIATELLKMLISISRKSLLCRASADQLITYIHELLPTIEEIKYSGVELPALRQSQLHLLSEILRSGVELSHKVLASSRWNVYRNLHLAKKMDKLEKTVSKFLLGPMQAHIMADVHHTRFEMAERFDRVDNSVRRLEQYFGNIKIGVGGGGWVEEAVRSVDENVVEGSSAVGLEFGKIKVREMIIGREDLWVVGISGIGGSGKTTLAREVCKDDQVRRYFRERILFLTVSQSPNVEQLRTKIWGYIMGNERLDSNYVVPQWVPQFECKSEAARTLIVLDDLWTFSVMEQLVCRIPGCKYLVVSRTKFQTVLNYEVELLSEEDALSLFCHHAFGQKSIPLGANENLAKQVVTECGRLPLALKVIGASLRDQPEMFWLSVKNRLSQGQSIGESHEINLIERMEISINYLPEKVKECFLDLCSFPEDKKIPLDVLINMWVEIHDIPETEAYAIVVELSNKNLLTLMKEPRAGGMYSSCFEISVTQHDILRNLAINLSNRASINERRRLVMPKRENAIPKEWLRYKHKPFEAQIVSIHTGEMKDVDWCNMEFPKTEVLIINFTSTEYFLPLFINTMPNLRALIIINYSATYACLHNISVFKNLPNLRSLWLEKVSTPELSGTVLENLGKLFIVLCKINNRLVEKEVDIAKVFPNLFDLTLDHCDDLTQLPSSICGMKSLQNLSLTNCHNLTQLPLELGKLKSLEILRLYACPDLKTLPNSICEMMRLKYIDISQCVNLTCFPEEIGRLVSLEKIDMRECSMIRNVPKSALSLQSLRLVICDEELSGIWKEVEKAKPNVHIQVSEQHFDLDWLKE 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00770 818 SUPERFAMILY RNI-like 555 784 - -
Vian7g00770 818 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 426 IPR027417 -
Vian7g00770 818 Pfam NB-ARC domain 197 395 IPR002182 GO:0043531
Vian7g00770 818 Gene3D - 326 410 IPR042197 -
Vian7g00770 818 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 816 IPR039203 GO:0050832
Vian7g00770 818 PRINTS Disease resistance protein signature 361 375 - -
Vian7g00770 818 PRINTS Disease resistance protein signature 200 215 - -
Vian7g00770 818 PRINTS Disease resistance protein signature 276 290 - -
Vian7g00770 818 PRINTS Disease resistance protein signature 678 694 - -
Vian7g00770 818 Gene3D - 411 497 IPR036388 -
Vian7g00770 818 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Vian7g00770 818 Gene3D Ribonuclease Inhibitor 545 802 IPR032675 -
Vian7g00770 818 Gene3D - 175 321 IPR027417 -
Vian7g00770 818 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 135 IPR008808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00770 Vian-Chr7 15955719 15959124 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00770 7 15955719 15959124 Vian7g00770 7 15955719 15959124 ECH