Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00768 ATGGAAATTATTAGCAACCAAAGTCCACACAAAGCAAAATCTCTTTCCACCGGAGCCCACCCCAACGATGCCGGACCCGATGACTGCACTCCATCGCGGCGGTTGACCAGGCAGAGGAAGCTCCGCCAACTCAGCGACCTTGGCTTCTCCTTCTTCCACTCCACCGACTCTTTTTCTGCCTCGCCGGAGCCCCGCTACCACTCCGCTTCCGAACACCGCTCCCTCTCTAGTCTGCCGCAGCCGCTGCCTCTCCCAGAAGCGCCGTTGACCCGTCGAGCCAAGTCAGTCAGCTCCGGTTCCGTACATCCTCCCCTCTCTGCTTCCGTAGAACATCCTAATTTTTCTTCTTCCGGGAAGGCGTTGCCTCATGATGCAGTGACACGTGAAAAACCTACACTCCATTTGGATTCTACTCCTGCAAATGCAAAATACAATCTGAGAGAGCATATTCCTGCAGCAAGTTTCTTGACAGGCCATAGTTCACTGAAAAATCGAAGAGCAGCATCTCATGGTAATGACTCTGAAGTTAATCCCCACTTGAATTTGGGTGTTGTTGCCAAGCCCAAGAGTGCTCCAACAAGTGTGGTCACTAGTCCTGATACTAGTCCATATAGATCAAATAACATAGACTTCTTTGATTCTACCTTCAACTTCTCTTCAGAAGTTAATGACAAATTGAAAATGTTATCAGCTAAAAGTGTACATAGTCCAGACCATTCCCTTATTCATTGTCCTCTAGGCCTCACTCGTTACTTCAATCCTAAAATTGAGGAGGGATCTCAGAACCATAAATTTTTGTCCAAGGTGTGCCCTGAAAATAACCATCTTGATGCACATCCCTTGCCTCTTCCTCCTAGAGCTTCATCTCCTGCACAATTATCTGTGCTGCATCAATCAAGTTCCATCCATCACGCTACTGAAACTATGCCTTCAGTCAAAGGTCAATGGCAGAAAGGAAAACTTATCGGACGAGGAACCTTTGGAAGGGTTTTTCATGCAACCAACCTGGAAAATGGAGCCTCGTGTGCAATGAAGGAGATCAATTTAATTCCTGATGATCCTACATCTGCCGAGTGCATGAAACAACTGGACCAGGAAATCAAAATTCTTCATCAACTAAACCACCCCAACATTGTGCGGTATTACGGAAGTGAAATAGTTGGCAATCATTTGTACATATATATGGAATATGTCCATCCAGGATCAATCAGTAAATTTATGCGTGAGCATTGTGGAGCTATGACAGAATCTGTAGTTCGCAATTTTACAAGGCATATTCTCTCTGGTTTAGCTTACTTACACAGTAACAAAACCATCCACAGAGATATCAAAGGTGCAAACTTGCTGGTCAATGGATCCGGCATTGTGAAACTTGCAGATTTTGGGCTAGCGAAAATTCTGATGGGGAATTCATATGATCTTTCTCTAAAGGGTAGTCCTTACTGGATGGCTCCAGAGGTCGTGAAAGGTTCCATAAAGAACGAATCTAATCTTGATGTTGTCACGGGAATTGACATATGGAGCTTAGGGTGCACCATTATAGAGATGTTAACAGGCAAACCTCCTTGGAGTGAAGCTGAAGGGGCTTCAGCCATGTTCAAGGCACTGCAAGAGTCCCCTCCCATACCTGAAACACTATCATCAGTGGGAAAGGATTTCCTCCAAAAATGTTTCCAAAGGGACCCTGCAGATCGACCATCTTCATCAACTCTTCTTAAGCATGCCTTTGTGCAGAATTTGCATGATCAATATGTTCTAGGTCATCCACAATCCTTTCCTAGAGGAGACCTTGGACCAGGAGGAAATTCAGCTAGTCCTAGAGACACCACCACCACCAGAAGTGGCATAATTCAAGCCTCCAGTAGCTCACGGTGTTTTAACAAGATTCAGAAACTAGTGGGTGATACTTCCGAACAAATCAATGACCACAAGGAGTCTAATCATGTTATACCTTTTAGTCACTCTCATGTTCCAGAAGTGAACATTCTTCAATCTACATTGAAACCTGGTACCCTCAATTACATGTCTGCTGAAAATTCTAGAAACATTTCCACCATGATGAGAATGATCACAAACTTCTGA 2082 0.4462 MEIISNQSPHKAKSLSTGAHPNDAGPDDCTPSRRLTRQRKLRQLSDLGFSFFHSTDSFSASPEPRYHSASEHRSLSSLPQPLPLPEAPLTRRAKSVSSGSVHPPLSASVEHPNFSSSGKALPHDAVTREKPTLHLDSTPANAKYNLREHIPAASFLTGHSSLKNRRAASHGNDSEVNPHLNLGVVAKPKSAPTSVVTSPDTSPYRSNNIDFFDSTFNFSSEVNDKLKMLSAKSVHSPDHSLIHCPLGLTRYFNPKIEEGSQNHKFLSKVCPENNHLDAHPLPLPPRASSPAQLSVLHQSSSIHHATETMPSVKGQWQKGKLIGRGTFGRVFHATNLENGASCAMKEINLIPDDPTSAECMKQLDQEIKILHQLNHPNIVRYYGSEIVGNHLYIYMEYVHPGSISKFMREHCGAMTESVVRNFTRHILSGLAYLHSNKTIHRDIKGANLLVNGSGIVKLADFGLAKILMGNSYDLSLKGSPYWMAPEVVKGSIKNESNLDVVTGIDIWSLGCTIIEMLTGKPPWSEAEGASAMFKALQESPPIPETLSSVGKDFLQKCFQRDPADRPSSSTLLKHAFVQNLHDQYVLGHPQSFPRGDLGPGGNSASPRDTTTTRSGIIQASSSSRCFNKIQKLVGDTSEQINDHKESNHVIPFSHSHVPEVNILQSTLKPGTLNYMSAENSRNISTMMRMITNF 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00768 693 MobiDBLite consensus disorder prediction 1 15 - -
Vian7g00768 693 MobiDBLite consensus disorder prediction 588 611 - -
Vian7g00768 693 MobiDBLite consensus disorder prediction 57 121 - -
Vian7g00768 693 ProSiteProfiles Protein kinase domain profile. 316 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00768 693 Gene3D Transferase(Phosphotransferase) domain 1 313 591 - -
Vian7g00768 693 SMART serkin_6 316 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00768 693 Pfam Protein kinase domain 317 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vian7g00768 693 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 68 590 - -
Vian7g00768 693 SUPERFAMILY Protein kinase-like (PK-like) 296 611 IPR011009 -
Vian7g00768 693 ProSitePatterns Protein kinases ATP-binding region signature. 322 345 IPR017441 GO:0005524
Vian7g00768 693 FunFam Predicted protein 312 592 - -
Vian7g00768 693 MobiDBLite consensus disorder prediction 93 115 - -
Vian7g00768 693 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00768 Vian-Chr7 15934699 15939756 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Vian7g00768 Pkinase 3e-66 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00768 7 15934699 15939756 Vian7g00768 7 15934699 15939756 ECH
Vian7g00768 7 15934699 15939756 Vian4g02276 4 39598958 39603631 PCT