Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00764 ATGTTGTCAAGAAAAACTGTTGTGTGGTTGATGTTTTTGTGTTGGTGGCTGTTTGGCATATCATGCGAGGGGAACAAACAAGGGGAATATCTGTACAGGTTAATTCGATCAAAGAGGAGTGATGAGAAAGGGATGTCATCAGAAGAAGCTTCAGTGGGCAGAAATGGTGGTGATGAAGATTTATGGAAGGTTGAAGAAGAAAGGGTGTTGATGGAAGGTGACAGAGTGAAGGGTTTACCAGGAGAACCAGAAGGTGTAGATTTTGATCAGTATGGTGGCTATGTAACTGTGGATGCCAAAAGAGGAAGAAGATTGTTCTATTACTTTGTAGAGTCACCTCAAAATGCTTCTAACAAGCCCCTCCTTCTATGGCTCAATGGAGGACCTGGTTGCTCTTCCCTTGGATATGGAGCCATGCAAGAATTGGGACCTTTTAGAGTGAACAGTGATGGAAGAACACTTCGTAAAAACGAATATGCATGGCACAATGTGGCAAATGTTATTTTCCTAGAGTCTCCAGCAGGAGTTGGATTTTCATATTCAAACACTTCTTCAGACTACTCAAACACGGGAGACAAGAGCACAGCAATGGACTCTTACACTTTTCTTGTAAAGTGGCTTCACAGATTTCCACACTACAAATCTCGAGACTTGTTCATCACAGGAGAAAGCTATGCTGGACATTATGTCCCTCAGCTAGCTCACACTATTCTCACTAATAATAAGCTTACAAATCTTACAGTCATTAACCTCAAAGGCATTGCGATTGGGAATGGTTGGATAGATGATAATATATGTGCAAAGGGAATGTATGACTATTTCTGGACACATGCTTTGAACTCAGATGAAACCCATGAAGGAATTGAAAGGCATTGTGACTTTGAGAGTGGGAACATGACAAGTGAATGCAACGAATACCAAATAAGAGGGGATAATGAGATTGGAGTGATTGACATTTATGACATATATGGTCCCCCTTGCGATCCAACTGCAACAAAACCTGATCAAAGTTCTGCCACTTACTCTGACAGCAATTTCGACCCTTGTTCTGACGAATATACTAAATCCTACTTGAATCTGGCTCAAGTACAAGAGGCTCTTCATGCTAAAGTCTCAGAATGGTCTCCTTGCAGTGGAGTGGGATGGACAGACAGCCCAGCAACAATTCTACCCACTATAAATCGGATAATATCAAGTGGCATAAGGACCTGGATATATAGTGGTGATACAGATGGGCGCGTTCCCATAACATCATCTAGGTATTCAGTAAATGCCTTGAAACTTCCAGTGGAGACAACATGGCGTCCCTGGTATTCTGGAGATGAGGTTGGAGGATACTTGATTGGGTACAAAGGACTCACCCTCATCACTGTAAGAGGAGCTGGGCACATGGTTCCAAGTTACCAACCAAAGCGAGCGTTAACCATGATCTCGTTTTTTCTTCGGGGAGAACTTCCTCCCGAATTGAACTCTTAG 1476 0.4262 MLSRKTVVWLMFLCWWLFGISCEGNKQGEYLYRLIRSKRSDEKGMSSEEASVGRNGGDEDLWKVEEERVLMEGDRVKGLPGEPEGVDFDQYGGYVTVDAKRGRRLFYYFVESPQNASNKPLLLWLNGGPGCSSLGYGAMQELGPFRVNSDGRTLRKNEYAWHNVANVIFLESPAGVGFSYSNTSSDYSNTGDKSTAMDSYTFLVKWLHRFPHYKSRDLFITGESYAGHYVPQLAHTILTNNKLTNLTVINLKGIAIGNGWIDDNICAKGMYDYFWTHALNSDETHEGIERHCDFESGNMTSECNEYQIRGDNEIGVIDIYDIYGPPCDPTATKPDQSSATYSDSNFDPCSDEYTKSYLNLAQVQEALHAKVSEWSPCSGVGWTDSPATILPTINRIISSGIRTWIYSGDTDGRVPITSSRYSVNALKLPVETTWRPWYSGDEVGGYLIGYKGLTLITVRGAGHMVPSYQPKRALTMISFFLRGELPPELNS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00764 491 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Vian7g00764 491 FunFam Carboxypeptidase 389 483 - -
Vian7g00764 491 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
Vian7g00764 491 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 75 470 IPR001563 GO:0004185|GO:0006508
Vian7g00764 491 SUPERFAMILY alpha/beta-Hydrolases 76 484 IPR029058 -
Vian7g00764 491 Gene3D alpha/beta hydrolase 71 329 IPR029058 -
Vian7g00764 491 Pfam Serine carboxypeptidase 80 482 IPR001563 GO:0004185|GO:0006508
Vian7g00764 491 ProSitePatterns Serine carboxypeptidases, histidine active site. 453 470 IPR033124 GO:0004185
Vian7g00764 491 FunFam Carboxypeptidase 347 485 - -
Vian7g00764 491 Gene3D - 389 483 - -
Vian7g00764 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Vian7g00764 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 453 466 IPR001563 GO:0004185|GO:0006508
Vian7g00764 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 157 169 IPR001563 GO:0004185|GO:0006508
Vian7g00764 491 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 180 IPR001563 GO:0004185|GO:0006508
Vian7g00764 491 FunFam Carboxypeptidase 70 329 - -
Vian7g00764 491 Gene3D - 349 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00764 Vian-Chr7 15879782 15885228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00764 354 484 Calmodulin-binding Proteins AT2G22960 28.676 1.67e-13 67.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00764 7 15879782 15885228 Vian7g00764 7 15879782 15885228 ECH