Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00730 ATGGAAGTTTCAAGTCTTCAAAAGTTGTTCAAGACAGCACCTTCTAAAGCATTGGTCATCAGAATCAACTTGGTCTGTCTTGCCATCTTTCTTGTCGTTTATGCAACCCTTCTTCTCCAACCATCTTCCTCAGTCTACTTTGAAAATGCAGCCTCCCTTGTTAGGTGCTCCTTGAGGGAATGCCATCACAAGGAAGAAAAAAGCATGAAGATGAAAGCAGTGTTGGAGGAACCAGAATTCAAAACTAGAATGCGAAAGCAGAATGCGAGTAAGATAGAGGTGCCTAGGTTCTTTGGTGAAATGGGGAAGGGATTGAAGATGGGAATGGTGAACATGCATGAAGATGATGTGAGTGAATGGAACAACCTTGGAGAAACAACAGAGGTTTATTTCGAAAGGGTGTCAGAGTTTTTCAATTGGACAGATTTATTTCCGGAATGGATAGATGAAGAGGAAGAGAGTGATGTTCCATCATGCCCGGAGATACCAATGCCAGAGTTTGCAGCATATGAAAACATGGACGTGATCATAGCCAAGTTGCCATGCAAGTACCCTGAAGAAGGGTGGGCAAGGGATGTTTTCAGGTTACAAGTTCATATGATTGTGGGGAATTTGGTGGTGAAGAAAGGGAAGAAGGATTGGAATTGGAAGACAAAGGTGGTGTTGTGGAGCAAGTGTAGGCCAATGATGGAGGTGTTTAGGTGCAACGATTTGGTTAAGCAGGAAAATGAGTGGTGGTATTATGAGGTTGATGTAAAGTGGTTGGAGCAGAAGGTGTCTTTGCCTGTTGGTTCTTGCAATTTGGCTCTGCCTCTGTGGGAACAAGGAATCGACAAGGTGTACGACACGTCAAAACTGGAACAGAACGTTCAAAGCGAAGCTCGAGCGAAACGCGAGGCCTACGCAACGGTTCTTCACTCGTCGGAAGGCTACGTTTGCGGCGCAATAACGCTGGCGCAGACGCTTCTCCGGACGGGAACCAAACGCGACCTCGTGCTCCTCCTCGACAGCTCCATCTCCGCCGTCAAGCGCCGCGCCCTCGAGCTCTCCGGCTGGAAGATCCGACTCATCTCCCGGATCCGGAACCCGCTGGCCGAGAACGGCACCTACAATGAGTACAACTACAGCAAGTTCAGGTTGTGGCAGTTGACGGAGTACGAGAGAGTGATCTTCATCGACGCCGACATCATCATCCTCCGCAACCTCGACATCCTCTTCAATTTCCCTCAGATGTCCGCTACCGGTAATGACCAGTCCATCTTCAACTCCGGCATCATGGTTCTCGAACCTTCCAACTGCACCTTCGATGTTCTCATGTCGCGCCGCCACGATGTCGTCTCGTACAACGGGGGCGACCAGGGTTTCCTGAACGAGATATTCGTGTGGTGGCACAGGCTTCCTCGGCGCGTGAACTTTCTGAAGAACTTCTGGGCGAACACGACGCTGGAGGCGAGTGTGAAGAACGCGATGTTCGGCGCGGACCCTCCGAGACTCTACGCGATCCATTACCTGGGTCTGAAGCCCTGGCACTGTTACAGGGACTACGACTGCAACTGGGATGTGGAAGATCAGAGGGTCTACGCCAGCGACGTGGCGCATCGACGGTGGTGGAAGGTTCACGACGCCATGGACTTGCGGCTGCAGAGCCTCTGCCGGTTGACCCGAAAGAGAAGGACGGAGCTCAACTGGGAGAGGCGAAAGGCAGGGAAGCTTGGGCTGCCGGACATGCACTGGAAGATCAATGTCACAGATCCCAGAAGACAAGGCTCGCTTTTGATTGATTAG 1785 0.5104 MEVSSLQKLFKTAPSKALVIRINLVCLAIFLVVYATLLLQPSSSVYFENAASLVRCSLRECHHKEEKSMKMKAVLEEPEFKTRMRKQNASKIEVPRFFGEMGKGLKMGMVNMHEDDVSEWNNLGETTEVYFERVSEFFNWTDLFPEWIDEEEESDVPSCPEIPMPEFAAYENMDVIIAKLPCKYPEEGWARDVFRLQVHMIVGNLVVKKGKKDWNWKTKVVLWSKCRPMMEVFRCNDLVKQENEWWYYEVDVKWLEQKVSLPVGSCNLALPLWEQGIDKVYDTSKLEQNVQSEARAKREAYATVLHSSEGYVCGAITLAQTLLRTGTKRDLVLLLDSSISAVKRRALELSGWKIRLISRIRNPLAENGTYNEYNYSKFRLWQLTEYERVIFIDADIIILRNLDILFNFPQMSATGNDQSIFNSGIMVLEPSNCTFDVLMSRRHDVVSYNGGDQGFLNEIFVWWHRLPRRVNFLKNFWANTTLEASVKNAMFGADPPRLYAIHYLGLKPWHCYRDYDCNWDVEDQRVYASDVAHRRWWKVHDAMDLRLQSLCRLTRKRRTELNWERRKAGKLGLPDMHWKINVTDPRRQGSLLID 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00730 594 CDD GT8_Glycogenin 299 543 - -
Vian7g00730 594 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 297 545 IPR029044 -
Vian7g00730 594 PANTHER GLYCOGENIN SUBFAMILY MEMBER 189 588 - -
Vian7g00730 594 FunFam Hexosyltransferase 296 547 - -
Vian7g00730 594 SUPERFAMILY Nucleotide-diphospho-sugar transferases 299 547 IPR029044 -
Vian7g00730 594 Pfam Glycosyl transferase family 8 368 510 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00730 Vian-Chr7 15533551 15537336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00730 71 593 Glycosyltransferase AT4G33330 66.226 0.0 739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00730 7 15533551 15537336 Vian7g00730 7 15533551 15537336 ECH
Vian7g00730 7 15533551 15537336 Vian4g02255 4 39427637 39431337 PCT