Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00706 ATGGCGAGATTCGCTCACCCTCTCAGTATCTTCACACAATCCCATTACTGGCGCCCACTTCTGTGTTGCCACTACTTCAAACGTACCCTAACTGCTAGTACTAACTTCTCCTCCCTCACTACATTAGCTCGAAGGGATCAATCACAAGAGGGAGGAACAACCACAGTTAAGCTTTCAACCAAAGCGAGAAGAAAAGCTTTCTATGAATCTCCTGAAGGGGTCTTATTGCGTAAGCTAAACCAGTGCTCAAGGGAGGGAGATGTTGTTCAAGCCCTTTGCCACTATGATGAGGCCAGAAAATTGGGGGTTGTACTCAACCTTGATCACTATAACAAATTGTTATACTTATGTTCTATTGAAAATGCTGATGTTGCCCAAATGGGTCTCAAAAGGGGGTTTGAGATATTTCAGCAGATGTTGAATGACCGAGTTCAGCCCAATGAAGCCACCTTTACCAATGCTGCCAGGCTTGCTGCTGCCAAGGAAGATCCTGATATGGCTTTTGAATTGCTAAAGCAGATGAAGAATGTTGCTATTGTTCCCAAGCTAAGATCGTATGAACCAGCTTTGTTTGGATTTTGCAAGAGGGGTGATGCTGAGAAAGCTTATCTAGTTGATGCTGACATGATTGAGTCTGGTATTGTGGCTGAAGAGCCTGAGCTTTCTGCTCTTTTGGAAGTCAGTGTCAAAACAAAGAAGGAAGACAGGGTATATGAGATTTTGCACCGTTTGCGCGCTACTGTGAGACAGGTGTCTGAAACAACTTCACGGATAGTTCAAGACTGGTTCAACTCAGAATATGCTGCAAAAATTGGAAAGGAGAAGTGGGATGTGAATAAAGTGAGGGAAGGGATTATTCAGGGAGGTGGAGGATGGCATGGTCAAGGGTGGCTTGGGAGTGGGCGATGGAAAATGGTGGAGACTCAGGTGAACGAGGATGGTGTGTGTCTCTCGTGTGGTGAGAAGCTTGTGAGCATTGATATTGATCCAAAAGAGACCGAAACCTTTGCTGCCTCATTATCTAAATTAGCTTGCCAAAAAGAAGCCAAGGAAAGCTTTGTTCATTTTCAGAAGTGGCTTGAGCGGCATGGCCCATTTGATGCTGTTGTAGATGGTGCAAATGTAGGCCTTTCCAATGGGCATAATTTCAGTTTTTCGAGGCTTAATACTGTTGTTGAACAATTACGTCAAATAAGCCCTTCCAAGAGATTCCCCCTTGTAATTTTGCATGCAAGCCGAGTATATGGTGGTCCTGCTCAAAATCCAAAAAACAGGAGACTTATAGAAAATTGGAAAAAAAATGGTGCTCTTTATGCTACACCTCAAGGTTCAAATGATGACTGGTACTGGTTATATGCTGCTGTTAGTTGTAAATGCTTACTGTTAACAGATGATGAGATGAGGGACCACTTGTTCCAGCTACTTGGTTCTAGTTTTTTCCCGAGATGGAAGGAAAAGCATCAGGTTCGAGCATCAACCTCAACTTCTGGAGGCTCCCTAATCATGCCTCCATGTTATTCTATAGTTATTCAGGAATCGGCCAATGGTAGCTGGCACGTGCCAACTATAACTAGTGATGATCCTGAGATCCCAAGGAAATGGTTGTGTGCCGCAAGATCCAAAAACAATTCATTGCATAGTGTATGGACATCCTCCTCCAAGTCTGAGTGA 1671 0.4387 MARFAHPLSIFTQSHYWRPLLCCHYFKRTLTASTNFSSLTTLARRDQSQEGGTTTVKLSTKARRKAFYESPEGVLLRKLNQCSREGDVVQALCHYDEARKLGVVLNLDHYNKLLYLCSIENADVAQMGLKRGFEIFQQMLNDRVQPNEATFTNAARLAAAKEDPDMAFELLKQMKNVAIVPKLRSYEPALFGFCKRGDAEKAYLVDADMIESGIVAEEPELSALLEVSVKTKKEDRVYEILHRLRATVRQVSETTSRIVQDWFNSEYAAKIGKEKWDVNKVREGIIQGGGGWHGQGWLGSGRWKMVETQVNEDGVCLSCGEKLVSIDIDPKETETFAASLSKLACQKEAKESFVHFQKWLERHGPFDAVVDGANVGLSNGHNFSFSRLNTVVEQLRQISPSKRFPLVILHASRVYGGPAQNPKNRRLIENWKKNGALYATPQGSNDDWYWLYAAVSCKCLLLTDDEMRDHLFQLLGSSFFPRWKEKHQVRASTSTSGGSLIMPPCYSIVIQESANGSWHVPTITSDDPEIPRKWLCAARSKNNSLHSVWTSSSKSE 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00706 556 Gene3D Tetratricopeptide repeat domain 71 539 IPR011990 GO:0005515
Vian7g00706 556 PANTHER UNCHARACTERIZED 58 540 - -
Vian7g00706 556 Pfam Pentacotripeptide-repeat region of PRORP 63 269 IPR033443 -
Vian7g00706 556 Gene3D - 328 502 - -
Vian7g00706 556 FunFam Proteinaceous RNase P 2 328 502 - -
Vian7g00706 556 Pfam Protein-only RNase P 310 536 IPR031595 -
Vian7g00706 556 CDD PIN_PRORP-Zc3h12a-like 368 490 - -
Vian7g00706 556 FunFam Proteinaceous RNase P 1, chloroplastic/mitochondrial 72 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00706 Vian-Chr7 15272788 15277455 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00706 79 240 Miscellaneous Gene Families AT4G11690 24.540 1.22e-09 58.9