Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00705 ATGAACAATTCGCTTTTTCTCCACAACGCAAACGCAATCCACTTCACTTTCCACTCTGCATTTTCACAAACACAACGCAGGCACGTTGCTTCCAACAAGCACTTATCTCAGCGTTACCCACGCATCCAATGCTGCTGCGTCGAAATCGACATGGTGAAGAACTCCCAAGGAATTTACGCCCCCAAAAGCGACAAGGTCGTTGTTCTCTGGGACCTCGACAACAAACCCCCTCGTGGGCCTCCATACAACGCCGCCGTTTCGCTCAAAACCCTCGCTTCCCGCTTCGGCGAGGTGACTGACTTCTCCGCCTACGCCAACCGCCACGCCTTCGTCCACCTCCCCCAGTGGGTCCTACACGAGCGCCGGGAACGCAGGAGCCTCGACATCCTCGAACGGAAGGGTGTGGTCACACCCTCGGAGCCCTACACGTGCGGGGTGTGTGGGCGCAAGTGTAAGACCCACATGGACCTGAAGAAGCACTTCAAGCAGCTGCACCAGCGCGAGCGTGAGAAGAAGCTGAACCGGTTGAAGTCGCTGAAGGGGAAGAAGAAACGGGACCGTTTCAAGGAACGGTTTTTGCGCGGAAATCATAAGTATAATGAGGCGGCGAGGACGCTGCTGGTTCCGAAGGTGGGGTACGGGCTGGCGGCGGAGCTGCGGCGGGCGGGGGTGTTTGTTAAGACGGTGGAGGATAAACCGCAGGCGGCGGATTGGGCCCTGAAGAGGCAGATGGTTCATTCCATGAGTAGAGGGATCGATTGGCTATTTTTGGTTTCGGATGATTCGGATTTTTCGGATATGTTGAGGAGGGCGAGGGAGGCGGATTTGGGGACTGTGGTGGTGGGTGATTGGGATAGGGCTTTGGGGAGGCATGCGGATTTGTGGGTGCCATGGAGTGGGGTTGAGAATGGGGAAGTGGAGTTGGTGCCCGAGATGAAGAAGAGAAGAGAACATGGTTTTCTGAATGATGACGATGATGATGATCACCATGATCGTGGTGATTGGGGAGGTTTGAATGAGGATGAGGAATTGGGGCAAGACTTTATGTTGCTGCATAGTGAGGATGAGGACGAAGATGAGGGAAACTATTATTACGATGATGAAGAAGAAGAAGAGGAAGACGGGTTGTATATATTATGA 1140 0.5395 MNNSLFLHNANAIHFTFHSAFSQTQRRHVASNKHLSQRYPRIQCCCVEIDMVKNSQGIYAPKSDKVVVLWDLDNKPPRGPPYNAAVSLKTLASRFGEVTDFSAYANRHAFVHLPQWVLHERRERRSLDILERKGVVTPSEPYTCGVCGRKCKTHMDLKKHFKQLHQREREKKLNRLKSLKGKKKRDRFKERFLRGNHKYNEAARTLLVPKVGYGLAAELRRAGVFVKTVEDKPQAADWALKRQMVHSMSRGIDWLFLVSDDSDFSDMLRRAREADLGTVVVGDWDRALGRHADLWVPWSGVENGEVELVPEMKKRREHGFLNDDDDDDHHDRGDWGGLNEDEELGQDFMLLHSEDEDEDEGNYYYDDEEEEEEDGLYIL 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00705 379 ProSiteProfiles Zinc finger C2H2 type domain profile. 142 170 IPR013087 -
Vian7g00705 379 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 26 367 - -
Vian7g00705 379 MobiDBLite consensus disorder prediction 317 379 - -
Vian7g00705 379 MobiDBLite consensus disorder prediction 352 379 - -
Vian7g00705 379 Coils Coil 162 182 - -
Vian7g00705 379 ProSitePatterns Zinc finger C2H2 type domain signature. 144 165 IPR013087 -
Vian7g00705 379 MobiDBLite consensus disorder prediction 317 351 - -
Vian7g00705 379 CDD PIN_LabA-like 152 283 - -
Vian7g00705 379 Gene3D - 59 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00705 Vian-Chr7 15269304 15270443 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00705 41 363 C2H2 Transcription Factor Family AT5G52010 65.579 3.26e-153 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Vian7g00705 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00705 7 15269304 15270443 Vian7g00705 7 15269304 15270443 ECH