Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00700 ATGAGTAGCATTCCTGCAAAATTGTTGGTCACAATTTTGTACATCTTCTTGGTGTCTCTTCCTGTGCACATGTCACCACATCATGTTAACACAGACACAAAGAATCTCAGAAGAAGTAGTAGCAGTGGCCACAGGAGCAAAGGTACTGGTAGTGGTGGTGGCTCAGCCAAAGGTTGCAACCACAGCAACACCACCCCATGTAAAAAATCTACTACCATTCAAGCAGTTCCAGCTTCACCCCCTCTTGTTTTTGCAGACCAAAGACTTCAAGTAGTGTATCCAGTAATCCAAAAGTTCAAATCTTCCATCACTTCTGATCCTCTGGGGGTGACCAACACTTGGGTTGGATCAGACATATGCAGCTATAGAGGCTTCTACTGTGACACTCCTCCTGACAACACTTCTGCCACTGCTTTGGCCTCTGTTGACTTCAATGGTTTTCAGCTTGCTGCTTCCACCCTTGATGGCTTCATTGATAACCTCCCTGACATTGCTCTCTTCCATGCCAATTCCAACAGTTTTGGTGGCACAATCTCACCCCAAATAGCCAAACTCCCTTACCTATATGAGCTTGATGTTAGCAACAATCAGTTATCTGGTCCATTTCCCTCTGCTGTTCTGGGCATGACTGGTTTAACATTCTTGGACTTGAGGTTCAACTTTTTCTCTGGGGCAGTGCCACCACAGATATTCATACAGAACCTCCAAGTCCTTTTCATAAACAACAACATCTTCACTCAAGGGTTGCCTGATAACTTAGCCACCACTCAGATTCTCTTACTCACCTTAGCAAACAACAAGTTCATGGGTCCTATCCCAAGAAGTCTTCCCAAGGCTTTGGCCTCTCTAAGTGAAGTGTTACTACTTAACAACCAGTTAACAGGTTGTTTGCCTTACGAGATTGGTTTTCTTCAAGAGTCCACAGTGTTTGATGCTGGGAACAACCAATTGACAGGCCCTTTGCCTTTATCTTTGAGCTGTCTTCAGAAGGTGGAGGTGCTCAATTTGGGTGGTAATCTTTTGTATGGCATGGTGCCAGAAGTGGTGTGTGCAGGGTTGGTGAATTTGGTCAACTTTTCATTATCAGATAACTATTTCACACATGTGGGGCCATTCTGTAGGATGCTGATTCAGAGAGGGGTTCTTGATGTTAGCAACAATTGTATTCCTGATCTTCCCTTTCAGAGATCAGTGTTTGAGTGTGCTGAGTTCTTTGCAACACCAAGGATGTGTCCCTTCATCTGGCTTTATAGCCTCATCCCTTGTAAGCTTCCTTTTCAAAATCCCATTCCTTAG 1296 0.4437 MSSIPAKLLVTILYIFLVSLPVHMSPHHVNTDTKNLRRSSSSGHRSKGTGSGGGSAKGCNHSNTTPCKKSTTIQAVPASPPLVFADQRLQVVYPVIQKFKSSITSDPLGVTNTWVGSDICSYRGFYCDTPPDNTSATALASVDFNGFQLAASTLDGFIDNLPDIALFHANSNSFGGTISPQIAKLPYLYELDVSNNQLSGPFPSAVLGMTGLTFLDLRFNFFSGAVPPQIFIQNLQVLFINNNIFTQGLPDNLATTQILLLTLANNKFMGPIPRSLPKALASLSEVLLLNNQLTGCLPYEIGFLQESTVFDAGNNQLTGPLPLSLSCLQKVEVLNLGGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTHVGPFCRMLIQRGVLDVSNNCIPDLPFQRSVFECAEFFATPRMCPFIWLYSLIPCKLPFQNPIP 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00700 431 MobiDBLite consensus disorder prediction 29 63 - -
Vian7g00700 431 MobiDBLite consensus disorder prediction 42 63 - -
Vian7g00700 431 Gene3D Ribonuclease Inhibitor 94 258 IPR032675 -
Vian7g00700 431 SUPERFAMILY L domain-like 97 389 - -
Vian7g00700 431 Gene3D Ribonuclease Inhibitor 259 401 IPR032675 -
Vian7g00700 431 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 48 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00700 Vian-Chr7 15207804 15209099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00700 74 408 Leucine-rich Repeat extension Gene Families AT3G24480 41.791 5.21e-83 261
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00700 7 15207804 15209099 Vian7g00700 7 15207804 15209099 ECH