Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00680 ATGGACCCATCTATCATGAAGCTTCTAGAAGATGACGAGGATGAAACAATGCATTCAGGGGTGGATGTGGAAGCCTTCCAGGCTGCTCTAAATAGAGATATAGGAGGAGATGTGTCTGCTTCTCAGTTTCCTGGTTCAGATGCAGTGTTGTCTCAAGGAAGCAATAATACATCAAGTCAATCTTCATCACAGTGGCCTACTTCTAACCATGACAGCCAAAGTGATGGTCAAAATCAAGAGCCTAAAACTGCACAAGAGCAACATCCATCTGAGATGGAGCCAAAGCAACATGGGTCTCTTGGCGAACACCTTCAGCATGTTGCTTCTCAGGATGTAAATAATATTCATTTATCACAGAAACAATCTCAAGATGACAGTCACCAAGCACCTGCTGTACAAGTTCCCCTCCACAATTCTCAAACTATTGGAATTCATAATTCTGGAAAGGATTCAGTGCTTAATAAAGAAGTAGTAAAGAGTCATAATCCCAGCAGTGAATCTCAGTATGCAAAGTTGCAGCAGATGAGTAATCAACAGGCTACAGTCTCTGAGCAGCCAAGTAGCCAAGTAAATCGTAGTAATAAACAAGTACCATTTGGCCTGTTGCTACCCATCTTGCTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACCTTGTTTACTAAATTGAAGAAAGACGAAATACAGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATCGTGGGGGACCAGATGCTTAGATTAGCATTAGCAAAGGTGCAAATGCAACCTCAGGCAAGGCCCAATCAAGCATCTGCCGGGCAGCAGCTTCCTGTAAGGATGCCAACTGTTAGTTCAGGTGCTAGACAATTGAACGATCCCCATGCTTTAGCACAGATGCATCAAAGAAGTATGAATGTTGCCGTTGACCAATCTCGCATGAGTTCTTCAGCTGGCCAAACCATAGATAGCAATGCTAGAAAATCTCAGGAATTTGATGTTAAAATAGAATCTCAAGGATTGCAACCAAACCAGTTGACGTCTTCCACTTCCAACTCTCCAGCTCAAGAAACAGAAAGAGCATCAGTTCACATACAAGGGCTCAATAAGCAGCAGCAACATCATCTACATTTTGCATCAGCATATGGAAACAGTGGTGGTAACTATAACCCTTATTCTGGGACAACAAGCACTTCCACTTCGTCTATCAAACCGCAATCACATGATTCACACATGAGTCAAATTCCTCATCAAGGTATTGGTTCAAATCACTTAGGTGGGTCAACACATGGTTTGGGTGTAATTGGTATGCCAAAACTTGAACAGCAGAATTCTTTCAATGATCCCAAGAGACTGCCAGGTGGATCTGTGTCCTCTGCTGTAAACAATGCAGCATCTCAACAAACTTCAAATGCTTGGCAACCATCAACAAACAAAGAACAAAATTTGGGCTTAATGTCATCTGTTTCTTATGTCAAGAAGGAACCTGGTGACTTGTCTACTGAGCAGCAAAATAGGCATAATTTGTCTAAATTGCATGGGTATTCTTCTGTTAATTCTGCTCAGCTTGAACAGAGTGGTGCCAGTCAAGGAGGTCTAAAAGACGAGTTTTCAAGAGGTCTTCCAGCATCTACAAGCATGCCACCTACAACATCTACTGGCTTGCTACCACACAGTTCTGCTTCTGCTTCTGCCGTGACCCACCTAGATTCCAGTGTCTTGATTCCATCAAATGCTTCTGGAATTGCTGCAAGGCCATCTCTTAAAAAGTCTGCTGCTACCCAAAAGAAACCACTTGAAGCACTTGGTTCCTCACCTCCTCCTTCTAGTAAAAAACAAAAAACTTCTGGGGGATATGCTGAACAAAGCATTGAACAACTTAATGACGTCACTGCTGTTAGTGGAGTTGACCTCAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCCAAAGAGGATAGTCGAGTGTCAGAAGCATCTCGAAAGGCTGTGCAAGAAGAAGAGGAGAGGCTGATCTTGCAGAAAGCTCCATTGCAAAAAAAATTAATTGACATCATGGCCAAATGTGGCTTGAAGGGTATGAGCAATGATGTGGAGAAATGCTTGTCACTGAGTGTGGAGGAAAGGATGCGCGGACTGATAAGTAACCTGATTAGATTATCAAAACAGAGGGTTGATTTTGAGAAAACGAGACATCGGACTGTTGTCACTTCAGATGTTCGGCAGCAAATCATGACAATAAATAGGAAAGTAAGGGAAGAGTGGGATAAAAAACAGGCGGAAGCAGAGAAGCTTCGGAAACTAAATGATGTTGACAGCAATACTGGAGGTGATGGTGACAAGGATAAGGACGACGGCCGTGCTAAATCAACAAAGGTGAACAAGGAAGAGGATGACAAGATGAGGACAAATGCTGCAAATGTTGCTGCTCGTGCTGCTTATGGGGGAGATGACATGCTGTCGAAGTGGCAACTTATGGCTGAGCAAGCCAAGCAGAAACGTGAAGGGGGAGTAGACGTGTCATCTGGGTCTCAACCAGCTAAAGATGTGAACCGCAAATCTTCATCAACATCTGAAAGAAATACAAAGGATAACCAAGAAGGGGAGAAAAGAGGTTCAACCCCTTTTCTAGCAAGTTCAGTGGCCAGAAAACTCGGGAAGAGTCATGCCATGGCCCCTCAAACTAGGGTAGCTCGAAGCATCTCTGTCAAGGATGTGATTGCAGTCCTGGAGAGGGAGCCCCAAATGTCTAAATCCCCACTCATACATCGCTTGTACGAGAAAATTCATTCTGAAACCCCAGTTGAACAAGGTTAA 2799 0.4359 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGDVSASQFPGSDAVLSQGSNNTSSQSSSQWPTSNHDSQSDGQNQEPKTAQEQHPSEMEPKQHGSLGEHLQHVASQDVNNIHLSQKQSQDDSHQAPAVQVPLHNSQTIGIHNSGKDSVLNKEVVKSHNPSSESQYAKLQQMSNQQATVSEQPSSQVNRSNKQVPFGLLLPILLPQLAKDRAMQLQTLFTKLKKDEIQKDSFVRLMKGIVGDQMLRLALAKVQMQPQARPNQASAGQQLPVRMPTVSSGARQLNDPHALAQMHQRSMNVAVDQSRMSSSAGQTIDSNARKSQEFDVKIESQGLQPNQLTSSTSNSPAQETERASVHIQGLNKQQQHHLHFASAYGNSGGNYNPYSGTTSTSTSSIKPQSHDSHMSQIPHQGIGSNHLGGSTHGLGVIGMPKLEQQNSFNDPKRLPGGSVSSAVNNAASQQTSNAWQPSTNKEQNLGLMSSVSYVKKEPGDLSTEQQNRHNLSKLHGYSSVNSAQLEQSGASQGGLKDEFSRGLPASTSMPPTTSTGLLPHSSASASAVTHLDSSVLIPSNASGIAARPSLKKSAATQKKPLEALGSSPPPSSKKQKTSGGYAEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRKAVQEEEERLILQKAPLQKKLIDIMAKCGLKGMSNDVEKCLSLSVEERMRGLISNLIRLSKQRVDFEKTRHRTVVTSDVRQQIMTINRKVREEWDKKQAEAEKLRKLNDVDSNTGGDGDKDKDDGRAKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGGVDVSSGSQPAKDVNRKSSSTSERNTKDNQEGEKRGSTPFLASSVARKLGKSHAMAPQTRVARSISVKDVIAVLEREPQMSKSPLIHRLYEKIHSETPVEQG 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00680 932 Pfam Transcription initiation factor TFIID component TAF4 family 622 918 IPR007900 GO:0005669|GO:0006352
Vian7g00680 932 CDD TAF4 617 918 IPR007900 GO:0005669|GO:0006352
Vian7g00680 932 MobiDBLite consensus disorder prediction 1 20 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 760 798 - -
Vian7g00680 932 ProSiteProfiles RST domain profile. 190 261 IPR022003 -
Vian7g00680 932 MobiDBLite consensus disorder prediction 581 616 - -
Vian7g00680 932 Pfam RCD1-SRO-TAF4 (RST) plant domain 193 256 IPR022003 -
Vian7g00680 932 MobiDBLite consensus disorder prediction 86 100 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 330 357 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 538 554 - -
Vian7g00680 932 FunFam Transcription initiation factor TFIID subunit 4B 665 712 - -
Vian7g00680 932 Coils Coil 742 762 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 44 85 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 303 322 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 435 476 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 36 101 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 384 420 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 601 616 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 173 192 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 847 864 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 517 554 - -
Vian7g00680 932 Gene3D Histone, subunit A 667 712 IPR009072 GO:0046982
Vian7g00680 932 MobiDBLite consensus disorder prediction 384 476 - -
Vian7g00680 932 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 6 924 IPR045144 GO:0005669|GO:0006352
Vian7g00680 932 MobiDBLite consensus disorder prediction 303 357 - -
Vian7g00680 932 MobiDBLite consensus disorder prediction 822 889 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00680 7 14944261 14952375 Vian7g00680 7 14944261 14952375 ECH