Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00673 ATGGAACCTGTTGGAGCCTTCCCTGATGGAGAATGGGATTGCTTTCGCAGAATGTTTGGCATTGAGGATCATGAGCATGATTTCACCCAGGAATTTCCTCTTCTGCTTGGTGGGGGAGATGAACTGAACATTGTAACACAGCATGCCAATTTTTGTGCTGCTCCTGAAGCTGTTGAAAACGAGCTGATGTTTTATTCTTTAGATGCTCACAACAACTCAAATTCTTCGCAGTATATTTCTCAGGAAAGTAGCTATAGTAATAGTAGCAATTGTAGTGGTGATGACACTGTCTTCATTGCCAATCCGGGTAGCTCAAACTATTATTTTTGTTACCCTGATCATATGTTAGCAGATAATGCATGTGTATATTCCTTGGATGAGAAACATTTTGCCCCTTTTGCTCCATCTCTTGCTAACATAGCAACCCAGGAGAGTGTGAAGCTGTATGAAGATTTGGCAAGTGACAGATTGGAGAGTTTCGAATGCAATCAAATTGAACCTGTTGTTTTTCCTTCCAAGAGGAGGCTTGATGTTCCTGCTGAAGGTAAAATCAACAACAGATCAGAGAATCACAAGAAAAAAGCTCGTGTTTTAAAAGATGTGCAAGGATGTATGAAGAACAACACATGTTCCAAGAAGAATCAGAAACATGACAGCAATAGGGAAGATGCAGAAGAGACTAATGCAGGATCAGATGGACAAAGCTCTAGTAGTAACATGTCAGAGGATGATAACAAGGAAAATATTGGAGGAGCTACTTCAGAATCTAAATCTGTTCTCAACTCAAATGGAAAAACAAGAGCAAGTAGGGGATCAGCAACAGATCCCCAGAGCCTGTATGCAAGGAAAAGAAGAGAGAGAATAAATGAACGATTAAGAATCCTACAGAATCTTGTCCCCAATGGAACCAAGGTTGATATAAGTACAATGCTTGAAGAGGCAGTGAATTATGTGAAATTTTTGCAGCTCCAAATCAAGCTTTTAAGCTCTGATGATCTATGGATGTATGCTCCACTTGCTTATAATGGGCTTGACATTGGAATCAATTTGAACATGAAGAACTCCCTACCACTCTGA 1077 0.4002 MEPVGAFPDGEWDCFRRMFGIEDHEHDFTQEFPLLLGGGDELNIVTQHANFCAAPEAVENELMFYSLDAHNNSNSSQYISQESSYSNSSNCSGDDTVFIANPGSSNYYFCYPDHMLADNACVYSLDEKHFAPFAPSLANIATQESVKLYEDLASDRLESFECNQIEPVVFPSKRRLDVPAEGKINNRSENHKKKARVLKDVQGCMKNNTCSKKNQKHDSNREDAEETNAGSDGQSSSSNMSEDDNKENIGGATSESKSVLNSNGKTRASRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVNYVKFLQLQIKLLSSDDLWMYAPLAYNGLDIGINLNMKNSLPL 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00673 358 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 272 321 IPR011598 GO:0046983
Vian7g00673 358 Pfam Helix-loop-helix DNA-binding domain 282 322 IPR011598 GO:0046983
Vian7g00673 358 FunFam Basic helix-loop-helix transcription factor 273 330 - -
Vian7g00673 358 CDD bHLH_AtIND_like 273 335 - -
Vian7g00673 358 MobiDBLite consensus disorder prediction 206 284 - -
Vian7g00673 358 MobiDBLite consensus disorder prediction 211 228 - -
Vian7g00673 358 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 80 344 - -
Vian7g00673 358 MobiDBLite consensus disorder prediction 229 276 - -
Vian7g00673 358 Gene3D - 271 329 IPR036638 GO:0046983
Vian7g00673 358 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 272 336 IPR036638 GO:0046983
Vian7g00673 358 SMART finulus 278 327 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00673 Vian-Chr7 14863701 14865705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00673 196 356 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27740 59.884 4.42e-55 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vian7g00673 HLH 1.2e-08 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00673 7 14863701 14865705 Vian7g00673 7 14863701 14865705 ECH