Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00672 ATGCGAGGAGAGCACAGGGGACTCGTGCACTGCGTCGTGAGTCAAGTCCTGCCGTCACTCGCCATGGCCTCGGTGGAGCAGCCTCCTAAGAAGCGAAAGCTCTACGAGCCTTTACCGTCACCGCCACCGTCTTTGCCTCCGTCACCGCCGCCTCCTGCAACCGAACCGACCCCTCCCTCTCCGCAAACCCTACCTCCGCCGTCCCAGGAAGAGATTCTCGCAAAGCGGCGGAACAAGGACGAAATTCGAAGCGTCTACGAAGGTTACAAGCGGATTCAGCGTTGCTTGCTTCAGAAAGATGTTCCTTCCTCCATGGCAGACCTTGAACAGAGTTATCTCGTGCTCATAACTTCTTCCAGAGGTTGTATGAGTGTACAAAGAATTGTGGCCGATCTTATTCCTCGGTATGCATGTCACTGTCCAACAGCCTTGGAAGCTGCAGCTAAAGTTGTCATTAATATGCACAACTTTAGTTTGGCATTGATTAGTAGAGGAGAGGATTCCAACGGTATTGCATTTGAAACTGCTAGAGCCTGTATTTGTGGCCTAGCTGATGTCTGCTGTGTTGCTTCATCAGTGGCACCAACATCAGCTGTAATTAGAGGAATTTGCTCAGCAGTTTTTCAGAATGTGCTCACCTTTTTTATAGCCTTATGTGAAGAAAAGGATGACTTACATATGGTTGACAAGAATTTTCTGAATATGCAAGATAACCCCGAGGTCTTTTCTGAGTTGAAACAAAAGGTTTTAGAGGAGGATGAATCTCCATTGCGTAAACTGTCCAAATTTCGAGTATTATGTCTACTTCGGATTTTTTTCTCGTGTCCAAAAGATTTGCTTGCAGCTTGTTTGGATCTCTTAGGGTCTGCTACAAAAGAGGGAACTAACAATGAAGGACAGCATTTTTTGAGCCAGGTGACTAGCATGTTTGATGATGATAAAACAGTTCATCTTTTGGATAACGCAATTAGTAGACCTAAGTCATGTACAGATTCTACTGGGTCAGGAATCAGAGATGATGAGGTTGGTGAGGAAATTGTGACCGAAGACAACCATGTTTCTGGTGTTGATTCATCCGTTGGCAAGAGCTGCTTGCTTATACGGGTTCTTGACAAGGATCCCCCACTCCGGAAATGGATATTGTGTAGGTGTAAGAAGTTACTTGACTTGCTCCCAAATGCATCACTGGAGATTTTGTCAGTACTGCAAGGAATTATTGGAATGTTTCCTCAACAAACAGATTTGGAAGACTGTCAAGCAGATAGTGATGAAGATAAATCTGATTCTTCAATTTACATGAAGAGTAAGAAGTACATGGTTCCTAGAATCTCTGAGGAACATGAAAGCATTGGTGAATCATCTGGAAAAGGCAGCAATTTGAGAGTTTATGTTGGTTCTACTGATGGTTTTACTGATAAGGTTTCTGATAAATATGTGATGGCTCATAGCTCTGCAGTTTCTCTTGACAATGCTCCAGCATTGAAAGTGGATTTACAGTATGATAATGGAGTCTCAAAGCCCATGAACATTGGGGTGGGGGAAGAAGGAAATATGCCAAATGTTAGATGTTCCACACCTAGGGACTCAGTAAGCCATCAAGTATTTTCACCTGCAGTTAGAACACCAGTAAATTTTAGGAGTAATTCATTTGATGGTAGAAATGACTTTCTGAATGTAGAGAAAAATCAAGTCTCAAGTATGAATTTCAGTTCACCACCGTTGAGATCCTCTAGTGGATCTGCTAGTAATTCTTTGGCATCTCCTAATCATCATTTTATGTCACCAACTGCTTCAACAAAAGGTCAAATTGTGTGGTGCTGTGATGGGGATCCCGCAGCCATGGATATTGTCTCTGCTTCTAGGCTGCTATGGATAGGTTATGTGGGACCTGATGTGCCCGAAAGTCATATTAGGTTTCACCTAGAAAGATTTGGTCCTATTGAAAAATTTATTTTCTTCCCAGTTAAAGGATTTGCCTTAGTCGAGTACAGAAGGATCATTGATGCAATAAAAACTCGATACTGTTTACCTGGATGTTTCCCTTGCCGTGTAAAGTTCATGGATGTAGGACTTGGAACTAGGGGTGCAATGAACGGTGTTGCAGTTGGCTCTAGTTGTCATATTTATATTGGAAATATTCCCAGTCAATGGGCCAAGGATGAGGTCATGCATGAAACAAGAAAAATGATCCACAAGGGTCCTCTTGCATTCATTGATCTTAGCTGTGAGTTTGCATTACTTATGGAATTTGAAACGCCTGAAGAAGCTACAGCTGTCATGTTGCATCTGAGACAACTGCGAAGAGAAAGAAGTAACTACAACCAGCATTTTGGTCCAGCTCCAGGAACAGTTAATGTTGGAATTGGGCATGCTTATATGGATGGTGGAAGACCTGTACCTCCCCCTCCCCATCCTGACCTTCAAGTTAACAATTCTGCTGGATCTCCACATGCTCGAACTCTACCAGGGAGCCCCGCAGATAGCAGTCGAACAGGGATGTCTCACTTGTCCAACTTACTTGCTTCATTGCGCTCAAATAATATTGATGGAGCAGTTTCTACTCTAAAGAATCTCCGTGGTTGTCCTGGATTGTTCTTTCAGATAGAATTCAGGGCGGAGAGGGTTTTCGAGCTTCAAGGAGTAGCGCAGGAGGAGAAAGTGCGATTTGCGAACATAAGCATGGAGGGTAGTGCGGGCTACTGGTTCAGAGCCTGGAAGGAGAAAGCCAAGAATCGTTCGTGGGATGGGTTGAAGGAAGCCCTGGTGACAAGGTTTGGAACCTATGTTGAGCGTTTGGCGGCATCGAAACAGACTGGGATGGTGGCGATGCGGATTGCAAAGGATGGTGAAGAATTCCAGGGAGGCAAAAAGGTCGGGAACGGGAGCGGGATTGAAGACCAGTCGTCTTGGGGACGACCGAGCGAAGAGGTGACCTTGGGGGATGAGCAGAGGAAGAAAACCAACACAGACCGAACGGTTGAAGATAGTGGGAAGGAACCGAACGGTAGATCGAGGGTTGCCGAGCGGTCCGAGGTCAAGCGCAATATCCCAGGAAGGAAAGAGGAACAATGGAAGATAGTGGAGGAGGAATTGCCACCACCTAAGCCTCCTGACCTGAATTGGGAGATGTCAGAGGTTGGGGCAAGGAAACCTGACGGTTATGATAATTTGTCTCAGGATCCTCATCAAGGAGGTAATGTTCCACATTCACACTCTGGAGCACATGGACCTTCCATCCCACCACTGCAGCAAATTCAGTCATCTACTTTTTCTCACCCTGTTTATGCTCCTCCAAATGGTCCATGGGATCATCGGGGAATTAATAATCATTTTCCTGTCAACCAATTCAACACAGGAGTAATGCCAAATAATTTTCATGGTAATGCTGTTGTAAGTCCTTTTATTCCTGCTTCAGTGACTCCACTTGCTCAGATACAAGGAACTCCAATGCATCCCTATAACCAGCAGGTGCCTCCATCAATTGCACCACCACCTTTATCATCCTTACCACCTCCGCAGCCTGAAATGCCACCTCCACTTCCTCCTTCTCCACCACCTTTACCCCAGGTTCAGCCTCCCTTGGTTCCTCCACTGCCTAGTTCTCCTCCTCCCCCTCCTCCTCCGCCACTGCCTGTCCAAGAACCAGTCAATTTAGAATGTTCTGTACAGTCTTTGCAGTATCAATGGCAGGGGAATCTATGTAAAAGTGGGGTCAATTACTGTACAATTTATGCGTGCAAGGCAGATTCAGCTATTTGCCGATACTCAAATGCCATACCCGAGCCTGCTGAGTGGCCCACAAAATTAGACATGACAAAACGCACGGATCTTAGACATGTAAAATCAACATTTGCTGCTACACCATCTCATAGAGTAGGATTGATTTTCTTTTTATATTGCACTGACAAAGCTGCCGGCCTGGTAGATTTTGGTGAGTGTCCTAGTCCTGTTCAATGCGATTCAGCAGTGAGGACGTGTGGATTGACATCTTCCTTCGGCACTACTTGTCAGAAAACCACCGGCTTGCATGAAAAACACCCCACAAATAAGCGTCACCCAAATGACTGTCTTTCGTTTTACTTGTTCTTCTCTGGCCTTGAGATGTACGAGTGCTGTCTTGCTGTCATATGGGCAGTGAAACAAAGGGAAGTGTGCCGTCTGATCCCATCTTCCACTAGTGATCTCAAAAGGGATTTCATATCATACTTAAAGCAGAGGGACTGTGCTGGGGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGCTGCTATTCATTCTCCCCCACTCACTTGAAACTTGCTCTTTGCTTTCTATTGCACCTGATCCCTCAGATTGTCTCATTGCTTTGGTTCTTCCCAAAGAAACGAACTTTGAGTGGATATGA 4389 0.4523 MRGEHRGLVHCVVSQVLPSLAMASVEQPPKKRKLYEPLPSPPPSLPPSPPPPATEPTPPSPQTLPPPSQEEILAKRRNKDEIRSVYEGYKRIQRCLLQKDVPSSMADLEQSYLVLITSSRGCMSVQRIVADLIPRYACHCPTALEAAAKVVINMHNFSLALISRGEDSNGIAFETARACICGLADVCCVASSVAPTSAVIRGICSAVFQNVLTFFIALCEEKDDLHMVDKNFLNMQDNPEVFSELKQKVLEEDESPLRKLSKFRVLCLLRIFFSCPKDLLAACLDLLGSATKEGTNNEGQHFLSQVTSMFDDDKTVHLLDNAISRPKSCTDSTGSGIRDDEVGEEIVTEDNHVSGVDSSVGKSCLLIRVLDKDPPLRKWILCRCKKLLDLLPNASLEILSVLQGIIGMFPQQTDLEDCQADSDEDKSDSSIYMKSKKYMVPRISEEHESIGESSGKGSNLRVYVGSTDGFTDKVSDKYVMAHSSAVSLDNAPALKVDLQYDNGVSKPMNIGVGEEGNMPNVRCSTPRDSVSHQVFSPAVRTPVNFRSNSFDGRNDFLNVEKNQVSSMNFSSPPLRSSSGSASNSLASPNHHFMSPTASTKGQIVWCCDGDPAAMDIVSASRLLWIGYVGPDVPESHIRFHLERFGPIEKFIFFPVKGFALVEYRRIIDAIKTRYCLPGCFPCRVKFMDVGLGTRGAMNGVAVGSSCHIYIGNIPSQWAKDEVMHETRKMIHKGPLAFIDLSCEFALLMEFETPEEATAVMLHLRQLRRERSNYNQHFGPAPGTVNVGIGHAYMDGGRPVPPPPHPDLQVNNSAGSPHARTLPGSPADSSRTGMSHLSNLLASLRSNNIDGAVSTLKNLRGCPGLFFQIEFRAERVFELQGVAQEEKVRFANISMEGSAGYWFRAWKEKAKNRSWDGLKEALVTRFGTYVERLAASKQTGMVAMRIAKDGEEFQGGKKVGNGSGIEDQSSWGRPSEEVTLGDEQRKKTNTDRTVEDSGKEPNGRSRVAERSEVKRNIPGRKEEQWKIVEEELPPPKPPDLNWEMSEVGARKPDGYDNLSQDPHQGGNVPHSHSGAHGPSIPPLQQIQSSTFSHPVYAPPNGPWDHRGINNHFPVNQFNTGVMPNNFHGNAVVSPFIPASVTPLAQIQGTPMHPYNQQVPPSIAPPPLSSLPPPQPEMPPPLPPSPPPLPQVQPPLVPPLPSSPPPPPPPPLPVQEPVNLECSVQSLQYQWQGNLCKSGVNYCTIYACKADSAICRYSNAIPEPAEWPTKLDMTKRTDLRHVKSTFAATPSHRVGLIFFLYCTDKAAGLVDFGECPSPVQCDSAVRTCGLTSSFGTTCQKTTGLHEKHPTNKRHPNDCLSFYLFFSGLEMYECCLAVIWAVKQREVCRLIPSSTSDLKRDFISYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAPDPSDCLIALVLPKETNFEWI 1462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00672 1462 MobiDBLite consensus disorder prediction 977 1032 - -
Vian7g00672 1462 MobiDBLite consensus disorder prediction 1156 1212 - -
Vian7g00672 1462 SUPERFAMILY RNA-binding domain, RBD 610 680 IPR035979 GO:0003676
Vian7g00672 1462 MobiDBLite consensus disorder prediction 568 587 - -
Vian7g00672 1462 MobiDBLite consensus disorder prediction 24 67 - -
Vian7g00672 1462 Pfam SPOC domain 1383 1453 IPR012921 -
Vian7g00672 1462 SUPERFAMILY SPOC domain-like 1369 1421 IPR016194 -
Vian7g00672 1462 MobiDBLite consensus disorder prediction 1147 1212 - -
Vian7g00672 1462 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 23 1291 - -
Vian7g00672 1462 MobiDBLite consensus disorder prediction 808 832 - -
Vian7g00672 1462 MobiDBLite consensus disorder prediction 794 832 - -
Vian7g00672 1462 Gene3D - 612 688 IPR012677 -
Vian7g00672 1462 MobiDBLite consensus disorder prediction 952 1084 - -
Vian7g00672 1462 MobiDBLite consensus disorder prediction 34 66 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00672 7 14819849 14834280 Vian7g00672 7 14819849 14834280 ECH