Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian7g00664 ATGTTGTGTGCTTGTTCGGGGGAGCAATTCAAGTTTGAAGAGGCACCACAGTCACCTGAGTCCTTGGCAACAAGGGATTTCTCTGCAAGTGGTCTTTCTTCAAGGACTGGGGATTGGGAATCCAAATTTGATGAGACGCAAGTTGAAGAAGCTGAATCTACTCTAAAAGAAACACTCTCATTAAACTATGAGGAAGCTCGGGCTTTGCTGGGGAGGCTAGAATACCAAAGAGGGAACTTTGATGCTGCCCTTCAAGTTTTTGAAGGTATAGACATAAGGGTTTTGACCCCAAGGATGATCAAGGCAATAGCTGAAAGAACCAAGCAAAGAAAACCACGGTCAAAGGTGGATAATGTGCTTCCTAATGTAATGTCAATGCATTCAGTAAGCCTGCTTCTAGAGGCAATTTTGCTTAAATCCAAATCCTTAGAAGAACTTGGAAGATACACCGAGGCTGCGAAAGAGTGCAGAATTATTGTGGATACAGTAGAATCTGCTCTTCCAAATGGAATGCCTGAGGGTATCGGTGAAGATTGTAAGTTGCAAGAAATGTTCCACAAAGCATTGGAGTTGCTTCCAAATCTATGGATCAAATCTGGTTTTCTAGACGAAGCTGTCACTGCTTACCGGAGGGCTCTAATCAAGCCATGGAATTTGGAGCCGTGGAGATTGGCCAGGGTTCAAAAAGATTTGGCTACCACACTACTCTATGGTGGTGCTGAAGCAAACATACCCTCTCAGCTGCAAGTGAATGGTTTAACAACACCTATGAGTGGTACTGAAGAAGCCATACTTTTGCTGTTAATACTCTCAGGAAAGATGGCACTTCAGGAAATAGACTGGGACCCTGAAATAATGGATCATCTTACATTTTCTCTTTCAGTTACTGGAATGTTTGAATCATTGGCAGATAACGTAGAGAAGATCCTTCCGGGGGTTTATGATCGGGCAGAGAGGTGGCATTTTCTTGCTCTTTGTTACAGTGCAGCAGGACAGAATGAAGTGGCCTTGAACCTTTTGAGGAAAGCTTGTGGTAGTTCTGAAGCCAAGCATAGACCCTATTTTCCTTCATTTTTGTTTGCTGCAAAGCTGTGTTCTTTATGTCCAAACCATGCTCATGAAGGCATCAAATTTTCACAGGAAGTTATTGATCTAGCCAAGCATCAAAATGAGCATTTTCTGGGTGAGGGCCTAAAATTTATGGGCACTTGCCAAGGGGCGTCTGCCAGAGTATCTGTACTAGATTCTGCAAGAATTATATTTCAAAGAGAGTCTTTGTACTTTCTAAATGATGCTGTCGCTCTAAATGGAAATAATGATCCAGAAGTGATACTCAGCCTTGGATTGGAAAATGCAATGCAAAGAAATTTAAATACAGCATATGACAATTTAATGATATACTCTGACATGATGGCTGGCAGCTCAAAAAGAGGTTGGCAGTTGTTAGCACTCATAGTATCAGCGGAACAGAGGTTTAAGGATGCAGAAACTATAGTTGATTTTGCTTTAGATGAGGCTGGTAGCATAGACCAGTTAGAACTACTGAGACTGAAAGCTATTCTTCAAATTACACAGCAGCAACCCAAGAAAGCAGTAGAGACCTACAGAATCTTGCTAGCAGTAATTGAATCACAAAAGGAGCATTGGCTTCAGGCTAAGGCATTCAGGCATGAGGCATTAAAACAACAGAAGTTGGAAATGGAAGTCTGGCAAGATTTGGCCACCATTTATGTAGATCTTTGCTCCTTCCTAGATGCAAAAGCTTGTGTTGACAAGGCTCAGTTGATAGAATTTTTTTCTCCAAGAAGTTGGCATATTACTGGGTTGTTGTTTGAATCTCGGACATTGCATAAGGAGGCCTTAGCTTCCTTCTCAGTCTCATTGTCAATAGAACCGGATTACATTCCCAGCATCATTTCAGCTGCAAAATTAATGCTTAAACTTGGCATGCAATCACTCCCAATCACAAGAAGCTTTTTAATGAATGCTTTGAGATTAGATCCTACAAACCATGAGGCATGGTTTAACCTTGGACTAGTTTCAAAAATGGAAGGTTCATTACAACAAGCAGCAGATTGCTTTCAAGCCGCATATGAGCTGAAGCTTTCAGCTCCAGTGCAAGAATTTGAGTGA 2133 0.4163 MLCACSGEQFKFEEAPQSPESLATRDFSASGLSSRTGDWESKFDETQVEEAESTLKETLSLNYEEARALLGRLEYQRGNFDAALQVFEGIDIRVLTPRMIKAIAERTKQRKPRSKVDNVLPNVMSMHSVSLLLEAILLKSKSLEELGRYTEAAKECRIIVDTVESALPNGMPEGIGEDCKLQEMFHKALELLPNLWIKSGFLDEAVTAYRRALIKPWNLEPWRLARVQKDLATTLLYGGAEANIPSQLQVNGLTTPMSGTEEAILLLLILSGKMALQEIDWDPEIMDHLTFSLSVTGMFESLADNVEKILPGVYDRAERWHFLALCYSAAGQNEVALNLLRKACGSSEAKHRPYFPSFLFAAKLCSLCPNHAHEGIKFSQEVIDLAKHQNEHFLGEGLKFMGTCQGASARVSVLDSARIIFQRESLYFLNDAVALNGNNDPEVILSLGLENAMQRNLNTAYDNLMIYSDMMAGSSKRGWQLLALIVSAEQRFKDAETIVDFALDEAGSIDQLELLRLKAILQITQQQPKKAVETYRILLAVIESQKEHWLQAKAFRHEALKQQKLEMEVWQDLATIYVDLCSFLDAKACVDKAQLIEFFSPRSWHITGLLFESRTLHKEALASFSVSLSIEPDYIPSIISAAKLMLKLGMQSLPITRSFLMNALRLDPTNHEAWFNLGLVSKMEGSLQQAADCFQAAYELKLSAPVQEFE 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian7g00664 710 Gene3D Tetratricopeptide repeat domain 261 540 IPR011990 GO:0005515
Vian7g00664 710 Gene3D Tetratricopeptide repeat domain 22 250 IPR011990 GO:0005515
Vian7g00664 710 MobiDBLite consensus disorder prediction 14 42 - -
Vian7g00664 710 Gene3D Tetratricopeptide repeat domain 648 706 IPR011990 GO:0005515
Vian7g00664 710 MobiDBLite consensus disorder prediction 21 37 - -
Vian7g00664 710 ProSiteProfiles TPR repeat profile. 671 704 IPR019734 GO:0005515
Vian7g00664 710 SMART tpr_5 512 545 IPR019734 GO:0005515
Vian7g00664 710 SMART tpr_5 317 350 IPR019734 GO:0005515
Vian7g00664 710 SMART tpr_5 601 634 IPR019734 GO:0005515
Vian7g00664 710 SMART tpr_5 671 704 IPR019734 GO:0005515
Vian7g00664 710 SUPERFAMILY TPR-like 49 344 IPR011990 GO:0005515
Vian7g00664 710 Gene3D Tetratricopeptide repeat domain 541 647 IPR011990 GO:0005515
Vian7g00664 710 SUPERFAMILY TPR-like 538 702 IPR011990 GO:0005515
Vian7g00664 710 PANTHER PROTEIN NPG1 1 710 IPR043376 -
Vian7g00664 710 SUPERFAMILY TPR-like 424 594 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian7g00664 Vian-Chr7 14711404 14714164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian7g00664 1 709 Calmodulin-binding Proteins AT1G27460 58.205 0.0 834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian7g00664 7 14711404 14714164 Vian7g00664 7 14711404 14714164 ECH
Vian7g00664 7 14711404 14714164 Vian4g02186 4 38669417 38672683 PCT