Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian6g00014 ATGATGATGATGATGTTTGATGAGATGGGGTTTTGCAATGATTTGGATACTGTCACTGCGACCCTTGGAGAAGAAAATATTACCACTGGGCAAGCTGATCCAGAGGCCATAGTTGAGGATGATTTTAGTGATGAAGAAATTGGAGTAGATGAGCTTGAGCACCGGATGTGGAAGGATAAAATGCTTCTCAAGAGATTGAAGGAGCAAAGTAAATCCAAAGAAGGAATCGATGCCGACAAGCAGAGGCAGTCTCAAGAACAGGCAAGGAGGAAAAAGATGTCTAGGGCTCAAGATGGAATTTTGAAGTACATGCTGAAGATGATGGAGGTTTGCAAGGCACAAGGATTTGTTTATGGGATAATCCCCGAGAAGGGGAAACCAGTGACAGGAGCATCTGATAATCTTCGTGAATGGTGGAAGGATAAAGTGAGGTTTGATCGAAATGGACCTGCTGCTATAACAAAGTACCAGGCTGATAATGCTATCCCTGGAAGGAATGATGGATGCAATTCGATTGGTCCAACTCCACATACCTTGCAAGAGCTGCAGGACACAACCTTGGGTTCTCTCTTGTCAGCACTCATGCAACACTGTGATCCTCCTCAGAGGAGGTTTCCCTTGGAGAAGGGTATTCCTCCACCATGGTGGCCCACAGGAAATGAAGTATGGTGGCCACAAATTGGTTTACCTAAAGATCAGAGTCCTCCTCCTTACAAGAAGCCCCATGACCTGAAGAAGGCATGGAAAGTTGGTGTTCTGACTGCAGTTATAAAGCACATGTCCCCAGATATTGCCAAAATTCGGAAGCTTGTGAGGCAGTCTAAGTGCCTTCAGGATAAGATGACAGCCAAGGAAAGTGCAACCTGGTTGGCAATCATCAATCAGGAGGAGGCCTTGGCAAGAGAGCTTTACCCTGATTATATTCCCCCATTAGCCTCAGGTGGAGGGAGTGGATCTTTGGTGGTCAATGATGGCAATGAATATGATGTTGAAGGGGGTGAGGATGAGCCTAATTTCGATGTAGAAGAGAGGAAACATGAGAATATTCACATGTCCAATCTGGTGATGGAGAGAATGAGGGGAACTATGGGTGTTCAGCAGCCCTCTTTTTCTATCAAGGGAGAGGCAGTTACAAATTTGGATCTTCTTAGGAAAAGGAAGGTCTCTAATGACTTTAACATGATGGATTTGAAGATTTACACATGTGAACAGCCTCAGTGCCCTTACAGTCAAGTTCAGCTTGGTTTCCCGGATAGAATATCTAGGGACAATCATAGGTTAATTTGTGCTTTCAGAGGTCCTTCAGATTTTAGGGGTCCAAACTTTCATGTTAATGAGGTAAAGCCAGTCTCTAATGACTTTAACATGATGGATTTGAAGATTTACACATGTGAACAGCCTCAGTGCCCTTACAGTCAAGTTCAGCTTGGTTTCCCTGATAGAATCTCTAGAGACAATCATAGGTTAATTTGTGCATTCAGAGGTCCTTCAGATTTTGGGGGTCCAAACTTTCATGTTAATGAGGTAAAGCCAGTGATATACCCCCAGTCCTTTGTTCCACCCAAGTCTACTGCTCAGTCTGCTAACATGGTCCCGCCTGTAATTGATCTTACTGGGCTTGAAGTTTCAGAAGATGGTCAGAAAATGATCAGTGACCTTATGGCTAACTATGAAACAAATGTTCAAGGCAACAAAAACATAAGTTCATGTAATCGCATGGCTGCAGAGAATCCCTGCCTTCGACAGCATGGAATCACTATGGAAGGAAACATCTTTGATGAGCCCAACATGTCCAATAATCATCACGTATTTTCTAGAGAAGAAGGACAATATGAGCGGTTCAAAGCTTTGAATAATGCTCCCTTCGAGACCAATCACAACAACCATAACTTCAATTCAATGTTTGGGTCCTTTTGTGATTTGGCATCATTTGATTTCAAGGAGGACATGCAAGGAGTAGGGATGGATGATGCTCTTCAGAAACAGCCAGACTTTTCCATATGGTATCAGTGA 2013 0.4352 MMMMMFDEMGFCNDLDTVTATLGEENITTGQADPEAIVEDDFSDEEIGVDELEHRMWKDKMLLKRLKEQSKSKEGIDADKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAITKYQADNAIPGRNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGIPPPWWPTGNEVWWPQIGLPKDQSPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYIPPLASGGGSGSLVVNDGNEYDVEGGEDEPNFDVEERKHENIHMSNLVMERMRGTMGVQQPSFSIKGEAVTNLDLLRKRKVSNDFNMMDLKIYTCEQPQCPYSQVQLGFPDRISRDNHRLICAFRGPSDFRGPNFHVNEVKPVSNDFNMMDLKIYTCEQPQCPYSQVQLGFPDRISRDNHRLICAFRGPSDFGGPNFHVNEVKPVIYPQSFVPPKSTAQSANMVPPVIDLTGLEVSEDGQKMISDLMANYETNVQGNKNISSCNRMAAENPCLRQHGITMEGNIFDEPNMSNNHHVFSREEGQYERFKALNNAPFETNHNNHNFNSMFGSFCDLASFDFKEDMQGVGMDDALQKQPDFSIWYQ 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian6g00014 670 Gene3D - 174 307 IPR023278 GO:0003700|GO:0005634
Vian6g00014 670 SUPERFAMILY DNA-binding domain of EIN3-like 176 300 IPR023278 GO:0003700|GO:0005634
Vian6g00014 670 FunFam Ethylene insensitive 3-like 1 82 160 - -
Vian6g00014 670 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 10 452 IPR006957 GO:0003700|GO:0005634
Vian6g00014 670 Coils Coil 49 69 - -
Vian6g00014 670 FunFam Ethylene insensitive 3-like 1 170 307 - -
Vian6g00014 670 Gene3D - 82 159 IPR023278 GO:0003700|GO:0005634
Vian6g00014 670 MobiDBLite consensus disorder prediction 68 94 - -
Vian6g00014 670 Pfam Ethylene insensitive 3 50 297 IPR047091 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian6g00014 Vian-Chr6 514515 615919 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian6g00014 4 669 EIL Transcription Factor Family AT3G20770 53.551 0.0 651
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vian6g00014 EIN3 1.3e-129 No_clan