Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g01355 ATGGCTGACAAAGACAGCGTTTATGCAGAAGAAACTGAGAGGAGGGCTCCAATTTTCAGCTTCTTTAAAGATGCTAAACTAGTTTTCAAATTTGACAACCTTGGTTGTGAAATATTATCAATTGCATTGCCTTCAGCAATGGCTTTGATAGCTGACCCTATTGCTTCACTGGTTGACACAGCATTTATTGGTCAAATAGGTCCAGTGGAGCTTGCAGCTGTAGGGGTGGCCATAGCACTCTTCAATCAAATATCAAGAATTGCAATATTCCCACTTGTCAGTGTCACTACCTCTTTTGTGGCAGAGGAAGATACCCTTTCTGGAACCAGTCCTCAAGTAGAGAAGAATGAAAGGTCGGAGGCAGGTCCGATTGTAGATGCTGAAATGAAAGAACTAGTACCACTTAACAAAGATTTGACTGCTACTGACTGTAATATAGTTAAGTTTGAACATAAGAGAAGGCGTATCCCTTCTGCTTCATCAGCATTACTAATCGGTGGCATTCTTGGAATCATCCAAACAATGTTCCTCATAGTTGCTGCAAAACCTTTATTGAACTTCATGGGAGTAACCTCAGTAAGAGATATAACCAATGTAGCACTTGATCCTTTATTGATATATGTTTTCCGCTTGGGGGTCAGTGGTGCAGCTATTGCTCATGTTATATCTCAGTACCTAATTTCACTTATACTCCTGTGGAGCTTGATAGAAAAAGTTGATCTTATACCACCAAGCATCAAGCATTTACAATTTCATCGATTTCTTAAAAATGGCTTTCTACTATTCGTAAGAGTAATTGCTGTAACATTCTGTGTGACACTGGCAGCATCATTAGCTGCACGCAAGGGACCAACATCCATGGCTGCATTTCAAGTCTGCTTGCAGATTTGGTTAGCAGTGTCCCTTCTTGCTGATGGTCTCGCTGTTGCTGGACAGGCAATTCTTGCAGGTGCATTTGCAAACAAGGACTATGAGAAGGTCCAAGCAACTGCATATCGAGTATTACAGCTGGGTTTGCTTCTGGGGTTGGCTCTTGCATTCATTCTCGGAACAGGACTGCATTTTGGAGCTAAACTATTTACCAAAGATGTTGATGTCATTCACCTCATCAAAATTGGGATCCCGTTTGTAGCAGCCACTCAACCCCTCAACGCTTTGGCCTTTGTAATTGATGGAATCAACTTCGGGGCATCTGATTTTGCATATTCAGCCATTTCTTTGGTGGGTATTTTTCTTTCATGTCATGAGATAGATTACAATGCACTACTTCTTATAAACAATGAAGGCTCAATATTGGAAACTGCTTCATATTATTGTATGGTTGTGGTGGCAATTTTCAGCATAATTTGTCTACATTTTTTATCATCTGTTGGCGGTTTCATAGGAATTTGGATTGCTTTGACCATCTATATGGCTCTTAGAGCAATTGTGGGCCTTCTGAGGATTGGAACTGGATCAGGACCCTGGAAGATGATTAGGAGCTAA 1485 0.4094 MADKDSVYAEETERRAPIFSFFKDAKLVFKFDNLGCEILSIALPSAMALIADPIASLVDTAFIGQIGPVELAAVGVAIALFNQISRIAIFPLVSVTTSFVAEEDTLSGTSPQVEKNERSEAGPIVDAEMKELVPLNKDLTATDCNIVKFEHKRRRIPSASSALLIGGILGIIQTMFLIVAAKPLLNFMGVTSVRDITNVALDPLLIYVFRLGVSGAAIAHVISQYLISLILLWSLIEKVDLIPPSIKHLQFHRFLKNGFLLFVRVIAVTFCVTLAASLAARKGPTSMAAFQVCLQIWLAVSLLADGLAVAGQAILAGAFANKDYEKVQATAYRVLQLGLLLGLALAFILGTGLHFGAKLFTKDVDVIHLIKIGIPFVAATQPLNALAFVIDGINFGASDFAYSAISLVGIFLSCHEIDYNALLLINNEGSILETASYYCMVVVAIFSIICLHFLSSVGGFIGIWIALTIYMALRAIVGLLRIGTGSGPWKMIRS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g01355 494 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 193 493 IPR044644 -
Vian5g01355 494 NCBIfam MATE family efflux transporter 191 410 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian5g01355 494 Pfam MatE 262 408 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g01355 Vian-Chr5 36155631 36158859 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00353 11 3335962 3339673 Vian5g01355 5 36155631 36158859 PCT