Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00547 ATGAGAGAGGAGAACGTGAAGCAGCCATTGTTGGGGAGGAAGAAGTACTACGATAACTGCCCCGGTTGCAAAGTGGATCAGGCCAAAGAGTTGAGTGAGGGACAAGGCGTACCCATTAAAAATCTTGCTATCATATGGACATTGGTGTTGTCCAATGCACTGCCTATATCATCTCTCTTTCCATTCCTTTATTTCATGGTAAGGGATTTTAATATTGCGAAAACAGAAGCTGATATCAGTTCTTATGCTGGTTATATTGGCTCTTCATTCATGCTTGGCAGATGTTTGACATCTATATTATGGGGAGTTGTTGCTGATCGCTATGGTAGAAAGCCTGTAATGTTTGCAGGGATTGTGGTGGTTGTCATTTTCAACACACTATTTGGCCTCAGTACTAGTTTTTGGATGGCTCTTACTACAAGATTTCTTCTTGGAAGTTTAAATGGTATGCTTGGACCAGTGAAGGCCTATGCCACTGAAATTTTTCGAGATGAACACCATGCTCTAGGACTATCAACAGTCAGTGCAGCTTGGGGCACAGGTTTAATCATTGGCCCAGCATTGGGAGGCTATTTGGCTCAGCCAGTAGAGAAGTACCCACATTTATTTTCAAAGGGTTCCATTTGGGATAAGTTTCCATACCTCTTGCCCAACCTTGTAATATCAGCAGTAGCATTTTTAGTAATTATTTGCTGCTTCTGGATTCCGGAAACACTTCACACCCACAGTTGTAGTGATGAATCCGTGGAAGATGCTGAAGCTTTGGAAAATGGAAACAGTGGAGCTGGCAAAGACATGACAACTCAGAAGAATGAAAACCTCCTCTTGAATCGGCCCTTGATGTCATCTATCATAATTTACTGTGTTTTCTCACTTCATGATATTGCTTATCAAGAGGTTTTCTCATTATGGAGTGTCAGTCCTCGAAAGCTGGGGGGGTTGAACTTCTCAACAAATGATGTTGGCAATGTTCTTTCAATAACAGGTGTTGCAATGATCATTTACCAAATTTCGGTCTATCCATTTGTGGAAAGAGCTTGTGGACCTGTTGGAATTGGCCGCATTACAGGGATGTTATCAATACCTCTTTTGCAAAGCTACCCTTTCATAGCATTGTTGTCAGGTGTTGCACTAACCATAGTCATAGTTACTGCTTCAATTCTAAAGAATATTCTGTCTGCCACCATTATAACTGGTTTGTTCCTCCTACAAAACCGAGCAGTGGAGCAACACCAAAGAGGTGCAGCTAATGGCATTTCCATGACAGGCATGTCCCTATTCAAAGCTATTGGTCCTGCTACAGGTGGTGCAGTATTAACTTGGTCACAAAAGCGGATGGATGCTTCATTCCTCTCAGGCACCAATATGGTGTTCTTTGTCCTGAACATAATTGAAGCAATTGGAATAATAATGATGTTCAAACCATTTCTTGCTGAGAAGAAGAAAACACAGTCAGATCAGTTACAGTGA 1470 0.417 MREENVKQPLLGRKKYYDNCPGCKVDQAKELSEGQGVPIKNLAIIWTLVLSNALPISSLFPFLYFMVRDFNIAKTEADISSYAGYIGSSFMLGRCLTSILWGVVADRYGRKPVMFAGIVVVVIFNTLFGLSTSFWMALTTRFLLGSLNGMLGPVKAYATEIFRDEHHALGLSTVSAAWGTGLIIGPALGGYLAQPVEKYPHLFSKGSIWDKFPYLLPNLVISAVAFLVIICCFWIPETLHTHSCSDESVEDAEALENGNSGAGKDMTTQKNENLLLNRPLMSSIIIYCVFSLHDIAYQEVFSLWSVSPRKLGGLNFSTNDVGNVLSITGVAMIIYQISVYPFVERACGPVGIGRITGMLSIPLLQSYPFIALLSGVALTIVIVTASILKNILSATIITGLFLLQNRAVEQHQRGAANGISMTGMSLFKAIGPATGGAVLTWSQKRMDASFLSGTNMVFFVLNIIEAIGIIMMFKPFLAEKKKTQSDQLQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00547 489 Gene3D MFS general substrate transporter like domains 39 473 IPR036259 -
Vian5g00547 489 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 40 472 - -
Vian5g00547 489 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 480 IPR020846 GO:0022857
Vian5g00547 489 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 36 473 - -
Vian5g00547 489 CDD MFS_SLC46_TetA_like 45 474 - -
Vian5g00547 489 Pfam Major Facilitator Superfamily 46 383 IPR011701 GO:0022857|GO:0055085
Vian5g00547 489 SUPERFAMILY MFS general substrate transporter 40 482 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00547 Vian-Chr5 19272163 19286649 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00547 5 19272163 19286649 Vian5g00547 5 19272163 19286649 ECH