Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00528 ATGGATGGCTTTGGTGTCGCTGCTCCCAGCACCGATGATCACAAACCATTGCGACACACTTCCAAAAAAGGTGAAGTATTTGATGCATCACAATATGCATTCTTTGGGAAAAATGCTGCCGAGGAAGTTGAGTTGGGGGGGTTAGAAGATGAAGATGAATATAAGGCCATGCTTGCTGTGGAATTCAGCGAGGATGATTTATTTATCAATAAAGAAGAGGCAGAGGATATAAGATCACTTTCTGATATTGATGATCTTACTACGACTTTTTTAAAGTTGAACAAGGTTGTTAGTGGACCAAGAAGCCCAGGAGTTATTGGTGAACGGGGATCAAGAGAAAATTCCTCTGCTTCTGAATGGTCACAAAGGGATGACATTCCACACTGGTTTGATCAGCAAAGCTATGACAGTGAAGGGCAAGGATCTCAGGATGGCAATAGATGGTCATCACACCCCCATTCTTCTCTAACTCAGTTATATGACTCAAGGCCCTTGTACAGAACATCTTCATATCCCGAGCAGCAGCGACAGCTGCAACACCAACTCCAACATTGCTCTAGTGAACCCGTTCCTAACTGGTTTGATCAGGCTTTTTATGATAGTGAAAATACTGAGGACGGAAAGCGGTGGTCATCACAGCCACATTCCTCCACTGCCCAATTACAAGAATCAAAAACCTTGTATAGAACATCTTCGTATCCTGACAAGCGGCCCGAGCTTACTCGGTTTTCTAGTGAACCTATTTTGGCACCAAAATCCTCATTTACATCGTATCCTCCACCTGGTGGTAGGTCCCAACAGTCTTCCCCAAATCACAGTACAGGTCATTTGAACATTCCTTTTCATACTGGTGGAGCTCAGGTGGCTTTACCGTCACAAAATCGTTCTCATTATTTCAATTCTGTGCTACAGTTGAGTGGACCAAAACATGAGTCACATTTCAGTGGAAATGTGCACCCATTTACTACTGGCTCACCTCTAAATTATCGAATGCAGAATCCCTGGGTCAACCAATCTGGGTTGTATTCTGGAGATCATCCAAACCTCCTCAGTAATATGTTGCAGCAACAATTACACCATCAGAGTGGATCATTATCACCTCATTTATTGACCCAATTGCAGCAGCATAGACATCTTCATCCCATTCAGAAACCAGGACGCTACATGTCAGGTTTCCAATCCCATTTATTTAACCCTCAGCTTTCTTCTGGATCATCCATGGTTAGCAAATATGATCATATGCTTGGTCTTGCTGATACCAGAGAACACAGGCCAAAATCAACTCATAAGGGTAAACAGAGTCATCGTTTTTTGCAACAAGGTTCTGATGCCAGTAGCCAGAAGAATGAAAGTGGTTCACTACAGTTTAGGTCAAAGTATATGACTAGTGATGAAATTGAGAGTATTCTTAGAATGCAGCAAGCTGTGACTCATTGCAACGACCCCTATCATGATGACTATTATCACCAAGCTTGTCTTGCTAAAAAAGATGGGGCTAAGTTGAAACATTCATTTAGCCCAACACAACTAAAGGATGTTCCTGCACGAATCCGTGCCAATCTGGACTCCCCTGGTTTTGTTCAGGTTGATACTTTAGGGAGGGTTTCATTCCTTGCTAATCGTCAACCTCATGCTCTTTTTGAAGTTGATCCATTAAACTCTTCCACTAGTGGTAGTTCTGAGCGAAATATTTCAGAGAAGCCCCTTGAACAGGAGCCTCTGTTTGCAGCCAGAGTCGCAATTGAGGATGGTCTTTATCTTCTTCTTGATGTAGAGGACATTGATCGTTTTTTACAGTGTAATCAACTACAAGATGGTGGGACTCAATTAAGACGAAGACGGAAGGTCCTTATGGAAGGACTAGCATCATCTCTCCAACTCGTTGATCCACTGGGAAAGAATGGAAGCAAAGTTGGGCTTGGTGCTAAGGATGATGTAGTTTTCTTACTGTTAGTGTCTATTCCCAAAGGGCGGAAACTCTTGTCAAAGTATCTTCAGCTACTTGGTTCTGGTAGTGAGCTTATGCGGATAGTCTGCATGACCATCTTTCGTCATTTGAGATTTTTATTTGGTAGTCTACCATCCGAACCTGAAGCTGCCTTGAGTACAAGTAACCTTGCTAAGGTTGTTTGTAAGTGTGTTCGGGGAATGGATCTTGGTGCCCTAGGTGCTTGTCTTGCAGCTGTAGTTTGTTCCACAGAGCAACCTCCTTTACGCCCCCTTGGAAGTACAGCTGGAGATGGTGCCTCCCTTATTTTAGTATCTGTTCTTGAGAGGGCCACTGAACTTCTTACTGATCCCCATGGTGCTTGCAGCTATATAGCTAATCGTTCATTTTGGCAGGCCTCATTTGATGAATTTTTTGGCCTTCTCACAATGTATTGCATGAATAAGTACCAGAGTATCATGCAATCACTGCTTGTACAAGGGACGCCAAATGTGTCAGGTATTGGATCAGATGCTGCTAAAGCAATTAGTAGGGAAATGCCTGTTGAACTCTTGCGTGTAAGTCTTCCTCACACCAATGATAATCAGAGAAAATTATTACTAGATTTTGCTCAGCGGTCTGTGCCTGTGGTTGGAATTAACAATTATACTGGGAGCAGTGGGGGTCATGTGAACTCAGAGACTGTGCTTAGTTGA 2643 0.4309 MDGFGVAAPSTDDHKPLRHTSKKGEVFDASQYAFFGKNAAEEVELGGLEDEDEYKAMLAVEFSEDDLFINKEEAEDIRSLSDIDDLTTTFLKLNKVVSGPRSPGVIGERGSRENSSASEWSQRDDIPHWFDQQSYDSEGQGSQDGNRWSSHPHSSLTQLYDSRPLYRTSSYPEQQRQLQHQLQHCSSEPVPNWFDQAFYDSENTEDGKRWSSQPHSSTAQLQESKTLYRTSSYPDKRPELTRFSSEPILAPKSSFTSYPPPGGRSQQSSPNHSTGHLNIPFHTGGAQVALPSQNRSHYFNSVLQLSGPKHESHFSGNVHPFTTGSPLNYRMQNPWVNQSGLYSGDHPNLLSNMLQQQLHHQSGSLSPHLLTQLQQHRHLHPIQKPGRYMSGFQSHLFNPQLSSGSSMVSKYDHMLGLADTREHRPKSTHKGKQSHRFLQQGSDASSQKNESGSLQFRSKYMTSDEIESILRMQQAVTHCNDPYHDDYYHQACLAKKDGAKLKHSFSPTQLKDVPARIRANLDSPGFVQVDTLGRVSFLANRQPHALFEVDPLNSSTSGSSERNISEKPLEQEPLFAARVAIEDGLYLLLDVEDIDRFLQCNQLQDGGTQLRRRRKVLMEGLASSLQLVDPLGKNGSKVGLGAKDDVVFLLLVSIPKGRKLLSKYLQLLGSGSELMRIVCMTIFRHLRFLFGSLPSEPEAALSTSNLAKVVCKCVRGMDLGALGACLAAVVCSTEQPPLRPLGSTAGDGASLILVSVLERATELLTDPHGACSYIANRSFWQASFDEFFGLLTMYCMNKYQSIMQSLLVQGTPNVSGIGSDAAKAISREMPVELLRVSLPHTNDNQRKLLLDFAQRSVPVVGINNYTGSSGGHVNSETVLS 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00528 880 MobiDBLite consensus disorder prediction 204 278 - -
Vian5g00528 880 MobiDBLite consensus disorder prediction 210 229 - -
Vian5g00528 880 MobiDBLite consensus disorder prediction 1 22 - -
Vian5g00528 880 MobiDBLite consensus disorder prediction 422 455 - -
Vian5g00528 880 MobiDBLite consensus disorder prediction 434 455 - -
Vian5g00528 880 MobiDBLite consensus disorder prediction 133 184 - -
Vian5g00528 880 MobiDBLite consensus disorder prediction 247 278 - -
Vian5g00528 880 MobiDBLite consensus disorder prediction 97 184 - -
Vian5g00528 880 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 189 861 IPR039900 GO:0000290
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00528 Vian-Chr5 16435102 16448010 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00528 5 16435102 16448010 Vian5g00528 5 16435102 16448010 ECH