Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00492 ATGTCGGAGAGTGGCAGAAGACACGGCGGAGGCGAACAGCTCCTGACGGAGGAGGCCTCCGGAGATTTGTTATCACTGCCGTGGAGACTTAATGTGAAGGAGTTTCAGTTGCCACGCCAAAGTCACAGCCATGAGCACCGTGATAGCCCAACTTACTTCACTTTTCACCGTCTTTTTCGGAAACCCAAAAAGGAACGCAAGGTTGCAGAATACTACAAGAAACAGGAGAAGCTCCTTGAAGGGTATAATGACATGGATTCGATGACTGAAACGGGTTATTTCCCTGGAAGTCTCACTGAGGATGAAATGAAGCAATTAGCAAGAAGTGAGAGACTGGCAGTGAATGTGTCGAATGCTGCTAACTTGGTGCTATTTGCAGCAAAGGTTTACACTTCCATTCAGAGCAAATCATTAGCAGTCATTGCTTCCACCATGGATTCTCTCTTAGATCTCTTGTCTGGCTTCATATTGTGGTTCACTGCCTATGCCATGAGAAATCCAAACCAGAATGGACAAAAAAAGAAACAGATGAATAAGGAAAACTTTTTGGATTCTAGTCTTTCATGTGATGTGTTAAGTTCTAAGCCTGAAATGGATTCCCAAGAGTTGAAATGGATGATCGGTATTATGGCATCTGTTACTGTAGTGAAGTTCGTACTCATGATCTACTGTCGAAGGTTTAAGAACGAAATTGTCAGAGCCTATGCACAAGATCATTTTTTTGATGTTATCACTAACTCAGTTGGATTAGTTGCTGCTGTGCTTGCTGTGAAGTACTCTTGGTGGATTGATCCAATGGGAGCTATTATTATAGCTGTGTACACAATTAGCACATGGGCAAAGACAGTGATTGAGAATGTGTGGTCTCTTATTGGAAGAACAGCACCACCTGATTTTCTGGCAAAGTTGACATATCTGATATGGAATCACCATGAAGAGGTTAAGCACATAGACACTGTGAGAGCATACACCTTTGGTGCTCATTACTTTGTTGAAGTGGACATAGTGTTGCCAGAAGATATGCCTCTCAGTCAAGCACACAACATTGGTGAGACATTGCAGGAAAAATTGGAGCAACTTCCTCAAGTTGAAAGAGCCTTTGTTCACATTGATTTTGAGTTTACTCACAGACCTGAACATAAGATGATGGTATAA 1155 0.4225 MSESGRRHGGGEQLLTEEASGDLLSLPWRLNVKEFQLPRQSHSHEHRDSPTYFTFHRLFRKPKKERKVAEYYKKQEKLLEGYNDMDSMTETGYFPGSLTEDEMKQLARSERLAVNVSNAANLVLFAAKVYTSIQSKSLAVIASTMDSLLDLLSGFILWFTAYAMRNPNQNGQKKKQMNKENFLDSSLSCDVLSSKPEMDSQELKWMIGIMASVTVVKFVLMIYCRRFKNEIVRAYAQDHFFDVITNSVGLVAAVLAVKYSWWIDPMGAIIIAVYTISTWAKTVIENVWSLIGRTAPPDFLAKLTYLIWNHHEEVKHIDTVRAYTFGAHYFVEVDIVLPEDMPLSQAHNIGETLQEKLEQLPQVERAFVHIDFEFTHRPEHKMMV 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00492 384 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 295 371 IPR036837 -
Vian5g00492 384 Pfam Dimerisation domain of Zinc Transporter 297 371 IPR027470 -
Vian5g00492 384 Gene3D Cation efflux protein transmembrane domain 187 290 IPR027469 -
Vian5g00492 384 Gene3D Cation efflux protein transmembrane domain 112 177 IPR027469 -
Vian5g00492 384 PANTHER MITOCHONDRIAL METAL TRANSPORTER 1-RELATED 44 169 - -
Vian5g00492 384 FunFam Metal tolerance protein 11 293 373 - -
Vian5g00492 384 SUPERFAMILY Cation efflux protein transmembrane domain-like 109 168 IPR027469 -
Vian5g00492 384 Gene3D Cation efflux protein, cytoplasmic domain 295 372 IPR036837 -
Vian5g00492 384 Pfam Cation efflux family 197 290 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vian5g00492 384 Pfam Cation efflux family 117 169 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Vian5g00492 384 SUPERFAMILY Cation efflux protein transmembrane domain-like 202 292 IPR027469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00492 Vian-Chr5 14126002 14132126 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00492 5 14126002 14132126 Vian5g00492 5 14126002 14132126 ECH