Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00490 ATGGTTTCTCTCACGGAAAAATCTAGAGTGGGCTCAACTCGAGCCTCTGTGGTCGCTGCTGCCGCCCAATCTCGCCCAAGCGCAGTGGGTGGTAGGAAGTTCAAGGTATTTTCGGAAATGGACCGGACTAAAGCTGGTGATGGGAATACGACTTCTGCCAGTGGAACAGTTGCAAATTCAAGAAGGAGTACCGTGGTGGCTGGCAAAGGGAATATTCTTAACAGTACCAGTAATCCAAAGGGTGGTCTCAAACAGAGTATGGATAAAAGTAGTGGCAAATATGGTACTTCTGTGAGAAAGGCATTGGCTGATGTTAGCAATGTTGAAGAAAAGTTCACAGCAGCTCTTGGGCATGCTAACTCAAAAATGAAGGTTTCAACAGGTTCAAGTACAAAAATAGTGGGTGTATCTTTGAGGAAGTCCATCACGGGAAGAGTGCAAAGAAATAATAGTAAAGCTGATGCTCGATTAGATGCTCTCAATAAAGATGATCAAAAGAATAATACAAAAGGAGGCCAATCAGTTTTCTCCACAAAGGACAGGTTTACATGGAAGACTACAGCTACGAGCACTTCAAGGAAGTCTTTACCAGTACCAAGGAGGGTAATCAGAGAAGATACGAGTAAACCAAAGGAAAATGTTAGTTCTCAAACAGCAAGAGGCCAAAGTTGTCTTCCCTCTAAGGCAACAACAAATAGAAAAGATAGTTCCCAACTGGTTAATGCAAGAAGCCATCTATGGAAGAATCGAGTGAGTGATGGTTTTGTTCTGACGGTTCAGCCTAATGTCTCACATGCATCCTTAAGGAAGTCTGCCAAGCCAATTGTTAAGACCACACTCAAGGCTTCCATTGCGCAAAGGACTTCAAAATCTAAATCCATATCAGCTCCGAGTAAATTAGAATCAACTATTGCAACGTCATCTCAGAACAAATCCATATCAGCTCAGAACAAATTAGAATCGGCTAGTGCAACCTTATGTCAGGAAAAAGAAACAGTTTCGTTGTCTCTTCCTGGGAATGACTCGACAGTATCTGATGATGCAAATAAAAGACATCTTCCATCTGAGAGCACACTAAAAACTGATCTGTCAGAGATTATTCCAAGGAAAAAATCCAGCCGCCGAAAATCATATACAAGTTCATTAATTGAAGGATCTAAGTTTCTCAAGGAAAGTGAAGTTAGAGAGCAAGATAACCTACCCAATATAGATAATGAAAGCAATCAATTTGAAGTTTCTGAATACGTTGATGACATATATCAGTACTATTGGGTTACTGAGGCACGTAATCCAGCTCTAGCAAATTACATGTCAATTCAGACTGACATTACACCACATTTGCGGGGCATTTTGATCAACTGGCTAATTGAAGTACACTTCAAATTTGATTTGATGCCAGAAACACTGTATCTCACTGTTACGTTGCTGGATCAATATCTCTCCCTGGTGACTATCAAAAAGACTGATATGCAGTTAGTTGGTCTTACAGCACTTTTGCTGGCTTCAAAATATGAGGATTTTTGGCATCCTAGGGTCAAAGATTTAATTAGCATCTCTGCTGGGTATACTAGAGATGAAATGCTTGGAATGGAAAAACTTATTCTTAGAAAATTGAAGTTCCGTCTCAATGCTCCTACTCATTATGTTTTTTTGGTGCGGTTTCTGAAGGCTGGACAATCAGATAAAAAGATTGAACACATGGCATTCTTTCTGGTTGACTTATGCTTAGTTGAATATGACGCTTTAGCATTCAAGCCTTCATTACTTAGTGCATCAGCTCTCTATGTTGCACGGTGTACTTTGCAAATATCTCCACCATGGACCCCATTACTTCACAAGCATGCGCGTTATGAAGTTTCACAGCTCAGGCATTTACTCAAACTTTTTCTATCACTTTTAAAGTTTGGGATGAATTCCATTTATGTTGACTGTAACATTTGTAGGGATTGTGCGGAAATGATACTCAAGTTCCACAAAGCTGCTGGGGTTGGAAAGTTGACAGTTGCGTATGAAAAGTACTCTAGACCAGAACTCGGTAAGGTTGCAGCAGTGAAACCTTTGGACGTACTTCCCCTGTGA 2079 0.406 MVSLTEKSRVGSTRASVVAAAAQSRPSAVGGRKFKVFSEMDRTKAGDGNTTSASGTVANSRRSTVVAGKGNILNSTSNPKGGLKQSMDKSSGKYGTSVRKALADVSNVEEKFTAALGHANSKMKVSTGSSTKIVGVSLRKSITGRVQRNNSKADARLDALNKDDQKNNTKGGQSVFSTKDRFTWKTTATSTSRKSLPVPRRVIREDTSKPKENVSSQTARGQSCLPSKATTNRKDSSQLVNARSHLWKNRVSDGFVLTVQPNVSHASLRKSAKPIVKTTLKASIAQRTSKSKSISAPSKLESTIATSSQNKSISAQNKLESASATLCQEKETVSLSLPGNDSTVSDDANKRHLPSESTLKTDLSEIIPRKKSSRRKSYTSSLIEGSKFLKESEVREQDNLPNIDNESNQFEVSEYVDDIYQYYWVTEARNPALANYMSIQTDITPHLRGILINWLIEVHFKFDLMPETLYLTVTLLDQYLSLVTIKKTDMQLVGLTALLLASKYEDFWHPRVKDLISISAGYTRDEMLGMEKLILRKLKFRLNAPTHYVFLVRFLKAGQSDKKIEHMAFFLVDLCLVEYDALAFKPSLLSASALYVARCTLQISPPWTPLLHKHARYEVSQLRHLLKLFLSLLKFGMNSIYVDCNICRDCAEMILKFHKAAGVGKLTVAYEKYSRPELGKVAAVKPLDVLPL 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00490 692 MobiDBLite consensus disorder prediction 1 20 - -
Vian5g00490 692 MobiDBLite consensus disorder prediction 1 27 - -
Vian5g00490 692 CDD CYCLIN_CCNB1-like_rpt1 412 540 - -
Vian5g00490 692 PANTHER CYCLINS 371 673 IPR039361 -
Vian5g00490 692 SUPERFAMILY Cyclin-like 407 543 IPR036915 -
Vian5g00490 692 MobiDBLite consensus disorder prediction 74 93 - -
Vian5g00490 692 SUPERFAMILY Cyclin-like 545 633 IPR036915 -
Vian5g00490 692 MobiDBLite consensus disorder prediction 186 238 - -
Vian5g00490 692 MobiDBLite consensus disorder prediction 212 238 - -
Vian5g00490 692 Gene3D - 433 537 - -
Vian5g00490 692 Gene3D - 538 690 - -
Vian5g00490 692 Pfam Cyclin, N-terminal domain 418 543 IPR006671 -
Vian5g00490 692 Pfam Cyclin, C-terminal domain 545 633 IPR004367 -
Vian5g00490 692 MobiDBLite consensus disorder prediction 74 94 - -
Vian5g00490 692 FunFam Cyclin N-terminal domain containing 2 433 543 - -
Vian5g00490 692 SMART Cyclin_C_2 545 687 IPR004367 -
Vian5g00490 692 SMART cyclin_7 549 631 IPR013763 -
Vian5g00490 692 SMART cyclin_7 453 536 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00490 Vian-Chr5 14056027 14071399 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00490 5 14056027 14071399 Vian5g00490 5 14056027 14071399 ECH