Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00488 ATGTCTACGTCCGCCGCTGGAGGTGCTGGATCCAATGATTCCAATGCTGGCAGGAGACAAAGCAAGAGGCCCAAGTACTCAAAGTTTACACAACAAGAACTACCAGCGTGCAAGCCTATTCTCACACCACGAGCAGTTATTTCAGCCTTCTTGATTGTCACCCTAGTGTTCATTCCCATTGGAGTTGCTTCGCTAATTGCTTCGCATGATGTTGTTGAGATTATTGATAGGTATGACTCTCAGTGCATACCAACAAATGTGACAGACAAGGTGGCATACATTCAGACTCCTGGTGAAAAGCCATGCAATAGGACGCTACTTGTGGACAAGCGTATGAAGTCTCCTATCTATGTTTACTACCAGCTTGACAACTTTTACCAGAATCATAGGCGGTATGTTAAAAGCCGAAATGATGACCAGCTGAGGGATTCCAAAAATGCTAACTCAACAAGTGGTTGTGACCCTGAAGATTCAGCAAATGGAATGCCAATCGTACCCTGTGGTCTTATAGCTTGGAGCTTGTTCAACGATACATACAGCTTCTCACGCAGCAGCATTAATTTGACAGTGAACAAGAACGACATCTCATGGAAAAGTGATAGGGATCACAAATTTGGAAGTGATGTTTTTCCTAAAAATTTCCAGAATGGTTCTTTAATAGGGGGTGGTAGTCTTAATGAAAACACACCTTTGAGTAAGCAAGAGGATCTCATTGTTTGGATGCGAACGGCAGCTTTGCCAACTTTTAGGAAGTTATATGGAAGGATTGAAGTGGATTTGGAGAAAGGTGATGTCATTCAGGTGAATTTGAACAATGTCTACAACACATACAGTTTTAATGGCAAGAAGAAGCTTGTTCTGTCAACTACTACCTGGCTCGGCGGGAAGAATGACTTCCTTGGCATTGCTTATCTTACTGTTGGAGGATTGAGCTTCTTTTTGGCCATGGTCTTTACTCTTGTATATCTTGTCAAGCCTAGGCAACTTGGAGATCCCTCTTATCTGTCATGGAATAGGAACCCTGGAGGGCAATGA 1035 0.43 MSTSAAGGAGSNDSNAGRRQSKRPKYSKFTQQELPACKPILTPRAVISAFLIVTLVFIPIGVASLIASHDVVEIIDRYDSQCIPTNVTDKVAYIQTPGEKPCNRTLLVDKRMKSPIYVYYQLDNFYQNHRRYVKSRNDDQLRDSKNANSTSGCDPEDSANGMPIVPCGLIAWSLFNDTYSFSRSSINLTVNKNDISWKSDRDHKFGSDVFPKNFQNGSLIGGGSLNENTPLSKQEDLIVWMRTAALPTFRKLYGRIEVDLEKGDVIQVNLNNVYNTYSFNGKKKLVLSTTTWLGGKNDFLGIAYLTVGGLSFFLAMVFTLVYLVKPRQLGDPSYLSWNRNPGGQ 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00488 344 MobiDBLite consensus disorder prediction 1 17 - -
Vian5g00488 344 PIRSF Lem3/Cdc50 1 340 IPR005045 GO:0016020
Vian5g00488 344 PANTHER CELL CYCLE CONTROL PROTEIN 50 18 337 IPR005045 GO:0016020
Vian5g00488 344 MobiDBLite consensus disorder prediction 1 30 - -
Vian5g00488 344 MobiDBLite consensus disorder prediction 136 157 - -
Vian5g00488 344 Pfam LEM3 (ligand-effect modulator 3) family / CDC50 family 65 328 IPR005045 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00488 Vian-Chr5 14019449 14023558 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00488 5 14019449 14023558 Vian5g00488 5 14019449 14023558 ECH
Vian11g01382 11 23115194 23130204 Vian5g00488 5 14019449 14023558 PCT