Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00471 ATGCCTGCTTCTGGTGCATCATTGGACCGGAATTGGCTTCTGGGGTTGCTTGGTTTGGGAGAAAAGGGAGCATCTATTTCTGATCATAATATCAAAACTTGGCTTCAGATATTGTTCCTCACACTTGTGATTGGATTCTGTTGTCTGTTGTATCAGTTAGCCGAAGACAGAGAAAGCAATCACAGTGTAAATGAGGTTGATGAGTTGGATGAATTCGACAACTTTTATGAGTCCTGGGAGAGAGAGCAGGAACACCCCAATGGTCAGTTAGACCGTTACTTTGATGAGGAGGATTCTCACCGGACCACCGTGTCCGGCGGCGGTGATGGGAGGAGAGACGGTGGCTGTGCCTTTTGTGGAAATTTCACTACCACAAGGTGCTCTCGCTGCAAGTCTGCTAGATATTGCTCTATGAAATGCCAAATTATACATTGGAGATCAATTCATAAATATGAATGCTATGAATCAAAGATTGCAGCAGATAAAGCAAAAACAACTGATAATGAAAGAACCTCAGAGGTTGTTGAGAATTCTGAAATGGAGAGTGCCTCTAATGCTTCCACTGTTGAAGATAGAGTTCTGTGGAGTCCAGAATCAGATATGGCAGTGAAAGTTTCCAGTGGTAACCATGTTAACAATTTGAATGGCTGTAAACTATGTGCTAAGCCAAGTACCACAAGATGTTCACGATGCAAAGCTGTGCAATACTGGAAAACTGTTTACATTAATTCCAGTTCCAGCTTCATGCAGTTGCTGGGTTATCAGTTTTTTGTTTTTCCTTTCTTTTTCTTTCAGCTCAGTGAAGTGCTTGATCATGGACTGGAAAAGGCATAA 834 0.4221 MPASGASLDRNWLLGLLGLGEKGASISDHNIKTWLQILFLTLVIGFCCLLYQLAEDRESNHSVNEVDELDEFDNFYESWEREQEHPNGQLDRYFDEEDSHRTTVSGGGDGRRDGGCAFCGNFTTTRCSRCKSARYCSMKCQIIHWRSIHKYECYESKIAADKAKTTDNERTSEVVENSEMESASNASTVEDRVLWSPESDMAVKVSSGNHVNNLNGCKLCAKPSTTRCSRCKAVQYWKTVYINSSSSFMQLLGYQFFVFPFFFFQLSEVLDHGLEKA 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00471 277 ProSiteProfiles Zinc finger MYND-type profile. 116 153 IPR002893 -
Vian5g00471 277 SUPERFAMILY HIT/MYND zinc finger-like 115 154 - -
Vian5g00471 277 ProSitePatterns Zinc finger MYND-type signature. 116 153 IPR002893 -
Vian5g00471 277 FunFam Ubiquitin carboxyl-terminal hydrolase 15 110 157 - -
Vian5g00471 277 Pfam MYND finger 116 153 IPR002893 -
Vian5g00471 277 Gene3D - 107 159 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00471 116 158 Miscellaneous Gene Families AT4G31670 53.488 4.82e-09 55.1