Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00466 ATGGCGAAAAAGGCAGTGTTGATCGGAATCAACTACCCGGGCACCAAGGCGGAGCTGAAAGGTTGCATAAACGACGTGTGGCGGATGCACCAGTGCCTCGTCGAGCGTTACGGCTTCTCCGAAGACAACATCACCGTGTTGATCGACACGGAGAAATCGTACACGGAGCCGACGGGGAAGAACATCCGGTCGGCGTTGACCTCGCTGGTCCGATCGGCGGAGCCCGGAGACGTGTTCTTCGTGCACTACAGCGGACACGGAACGCGTCTTCCTGCGGAAACGGGAGAGGATGATGACACTGGATTTGATGAATGCATTGTTCCTGCTGATATGAACCTCATCACTGATGATGATTTCAGGGAATTTGTTGAGGGGGTCCCTAGTGATTGTAAGCTCACAATAGTATCAGATTCTTGCCATAGTGGTGGCCTAATTGACGGAGCTAAGGAGCAGATAGGAAATAGTACGAAGAGAGATGAGCAACATTCTGGTTCTGGCTTTGGTTTGTCCAGTTTTCTACGTCGTACTGCGGAGGATGCCATTGAGTCTCGTGGAATTCATATTCCTTCAGCATTGCGCCATCATAGACACAAGCATGATGATGAAACTGATGATAGGGACATTGAACTTCCACATGAGCAGTATGGCCATGTAAAAAATAGGTCATTGCCACTTTCTACTGTCATAGAGATACTGAAGCAGAAAACTGGAAAAAGTGATATCGATGTTGGGAAATTGAGACTTTCACTTTACGATATTTTTGGGGAAGATGCTAGCCCTAAAGTAAAGAAGTTCATGAAGGTTATATTGAACAAACTCCAACACGGGGATGGTGGAAGTGACAAACACGGTGGAATCTTGGGGTTGGTGGGTAGTCTTGCCCAAGAGTTTATCAAGCAAAAGCTGGATGCTAATGATAATGGATATGCAAAACCTGCCATGGAAACACAGGTAGACAGTAAGTATGAAGCGTATGCTGGATCAACAAAGCCTCGTCTTCCAGACGGTGGAATTCTGTTGAGCGGTTGTCAGACTGATCAGACCTCTGCAGATGCAAGTCCAGCCGGTAATGCTGCCAATGCTTACGGAGCTTTCAGCAATGCAATACAGGCTATAATTGAGGAGACACGTGGTGCAGTCACAAATCAAGAACTTGTTTTGAAGGCAAGAGAGAAGCTTAAGAGAGGAGGTTTCACCCAAAGACCAGGACTCTACTGCAGTGATCACCATGTTGATGGTTCTTTCGTGTGTTGA 1254 0.4721 MAKKAVLIGINYPGTKAELKGCINDVWRMHQCLVERYGFSEDNITVLIDTEKSYTEPTGKNIRSALTSLVRSAEPGDVFFVHYSGHGTRLPAETGEDDDTGFDECIVPADMNLITDDDFREFVEGVPSDCKLTIVSDSCHSGGLIDGAKEQIGNSTKRDEQHSGSGFGLSSFLRRTAEDAIESRGIHIPSALRHHRHKHDDETDDRDIELPHEQYGHVKNRSLPLSTVIEILKQKTGKSDIDVGKLRLSLYDIFGEDASPKVKKFMKVILNKLQHGDGGSDKHGGILGLVGSLAQEFIKQKLDANDNGYAKPAMETQVDSKYEAYAGSTKPRLPDGGILLSGCQTDQTSADASPAGNAANAYGAFSNAIQAIIEETRGAVTNQELVLKAREKLKRGGFTQRPGLYCSDHHVDGSFVC 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00466 417 PANTHER METACASPASE-4 2 409 - -
Vian5g00466 417 SUPERFAMILY Caspase-like 6 135 IPR029030 -
Vian5g00466 417 Gene3D - 306 415 - -
Vian5g00466 417 Gene3D - 1 187 - -
Vian5g00466 417 Pfam Caspase domain 3 408 IPR011600 GO:0004197|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00466 Vian-Chr5 12629450 12631604 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00466 5 12629450 12631604 Vian5g00466 5 12629450 12631604 ECH