Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00463 ATGTGCAGCTCCAAGACCAAAGTGACTGTAGGCATAGAAGCCACAGCCACATACCCTTTGGCCAGAATCAATGGTAGGCCAGTTCTTCAACCTACTTGTAACAGAGTTCCTAATCTTGTGAGGAGAAATTCAATCAAGAAAGTGTCACCAAAATCACCTTCTCCACCTTCACCACCACTTCCAACCAAGACCTCACTCACACCTCCTGTTTCTCCAAAGTCTAAGTCCCCTAGGCCTCCAGCTATAAAGAGAGGCAGTGATAGTAATGGACTGAACTCAAGTTCTGAGAAGATTGTTACCCCAAGACACACCATCAAAACTCCAACTCTTGAGAGGAAAAAGTCTAAGAGTTTTAAGGAAGGATCCTGTGCCACTTCAGCTTCTTCTGCCTCCATAGAGGCATCGTTGAGCTACTCTTCCACTCTGATCACTGAATCCCCAGGAAGCATAGCTGCAGTGAGGAGGGAACAGATGGCACTGCAGCATGCACAGAGAAAAATGAAGATTGCCCATTATGGAAGATCAAAGTCTGCAAAGTTTGAAAGAGTTGTTCCTCTTGATCCTTCAACCAATCTTACTTCAAAGACAACTGAGGAGGAGAAGAGATGCAGCTTTATCACAGCTAATTCAGATCCCATCTATATTGCTTATCATGATGAAGAATGGGGAGTTCCGGTTCATGATGACAAGACTGCATTTTCAGAATTTGATGCAGCAACCTTGGCCAACATGACTGATAAGCAAATGGTATCTATTAGTTTGGAATATGGCATTGATATCAGCAGAGTTCGAGGTGTTGTTGACAATGCTAACAGAATTTTAGAGATTAACAAGGAGTTTGGTTCATTTGACAAGTACATTTGGGGTTTTGTGAATCACAAGCCCATCTCCACACAATACAAGTTTGGCCACAAGATTCCAGTGAAGACATCAAAATCAGAGAGCATAAGCAAAGACATGATCAGGAGAGGCTTTAGGTTTGTAGGTCCAACAGTGCTTCACTCATTTATGCAAGTAGCTGGACTCACCAATGATCACTTAATCACTTGCCATAGACACTTGCAATGCACCACAGAGTCCTCCCTATAG 1089 0.4316 MCSSKTKVTVGIEATATYPLARINGRPVLQPTCNRVPNLVRRNSIKKVSPKSPSPPSPPLPTKTSLTPPVSPKSKSPRPPAIKRGSDSNGLNSSSEKIVTPRHTIKTPTLERKKSKSFKEGSCATSASSASIEASLSYSSTLITESPGSIAAVRREQMALQHAQRKMKIAHYGRSKSAKFERVVPLDPSTNLTSKTTEEEKRCSFITANSDPIYIAYHDEEWGVPVHDDKTAFSEFDAATLANMTDKQMVSISLEYGIDISRVRGVVDNANRILEINKEFGSFDKYIWGFVNHKPISTQYKFGHKIPVKTSKSESISKDMIRRGFRFVGPTVLHSFMQVAGLTNDHLITCHRHLQCTTESSL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00463 362 PANTHER OS04G0501200 PROTEIN 231 359 - -
Vian5g00463 362 MobiDBLite consensus disorder prediction 51 76 - -
Vian5g00463 362 Gene3D Hypothetical protein; domain 2 233 357 - -
Vian5g00463 362 MobiDBLite consensus disorder prediction 86 102 - -
Vian5g00463 362 SUPERFAMILY DNA-glycosylase 201 356 IPR011257 GO:0003824|GO:0006281
Vian5g00463 362 MobiDBLite consensus disorder prediction 28 124 - -
Vian5g00463 362 Gene3D Hypothetical protein; domain 2 200 232 - -
Vian5g00463 362 Pfam Methyladenine glycosylase 231 353 IPR005019 GO:0006284|GO:0008725
Vian5g00463 362 Pfam Methyladenine glycosylase 208 233 IPR005019 GO:0006284|GO:0008725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00463 Vian-Chr5 12501697 12504029 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00463 5 12501697 12504029 Vian5g00463 5 12501697 12504029 ECH
Vian11g01369 11 22618749 22620788 Vian5g00463 5 12501697 12504029 PCT