Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00459 ATGTGGTACCAGCACAAGACAAAAGCCCTGGCAAAGTTCTTGTTGGTAGCAACAGTGATAGTTGGCATTTCCATGGGAGATTCTTCGTCAAATGACAAAGCTGAATGCGCACAGCAATTGGCGGGGCTAGCAACATGTTTGCCCTATGTTGGAGGTCAAGCACCAGCTCCAGCTACAGATTGTTGCAGTGGTCTGAAGCAAGTGCTGAAGAACAAGAAGAAGTGTTTGTGTGTAATCATCAAAGATCGCAATGATCCTGACCTTGGTGGTCTTCAGATTAATGTCACTTTGGCTCTGAATCTTCCCACTGCATGCAATTCCCCTGTCAATGTCTCCAAGTGTCCTGCAGAACTCTTGCACATGGATCCCAAATCACAAGAGGCTCAAGTTTTTTATCAGTTGGAGAAAGGAAAAAAAGGCACAAGTCCCGCACCAAGTCCTTCAGCTGCACTTGGAGCAAATCCTTCAAGCAACCAAACATCCAGTGCCCCACAGAAGCATGATGCATTCTGCAAAGAAAATGGATTTTTTAAGTTAAATGTTTTGGCTATTGGGCTTCAGGTCTGGGCTTTAACTGGGCTTTTGTCCTAA 591 0.4518 MWYQHKTKALAKFLLVATVIVGISMGDSSSNDKAECAQQLAGLATCLPYVGGQAPAPATDCCSGLKQVLKNKKKCLCVIIKDRNDPDLGGLQINVTLALNLPTACNSPVNVSKCPAELLHMDPKSQEAQVFYQLEKGKKGTSPAPSPSAALGANPSSNQTSSAPQKHDAFCKENGFFKLNVLAIGLQVWALTGLLS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00459 196 SMART aai_6 36 114 IPR016140 -
Vian5g00459 196 MobiDBLite consensus disorder prediction 136 166 - -
Vian5g00459 196 PRINTS Plant phospholipid transfer protein signature 35 51 IPR000528 GO:0006869|GO:0008289
Vian5g00459 196 PRINTS Plant phospholipid transfer protein signature 92 109 IPR000528 GO:0006869|GO:0008289
Vian5g00459 196 PRINTS Plant phospholipid transfer protein signature 56 70 IPR000528 GO:0006869|GO:0008289
Vian5g00459 196 MobiDBLite consensus disorder prediction 147 166 - -
Vian5g00459 196 CDD AAI_LTSS 43 106 - -
Vian5g00459 196 Pfam Probable lipid transfer 27 114 IPR016140 -
Vian5g00459 196 PANTHER BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED 17 155 IPR043325 -
Vian5g00459 196 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 35 115 IPR036312 -
Vian5g00459 196 Gene3D - 33 113 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00459 Vian-Chr5 12313476 12315059 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00459 12 178 Acyl Lipid Metabolism Gene Families AT2G44300 50.811 4.03e-52 164