Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00457 ATGCATTTAAAGCGTTTTCGAGATTTACTATTGTTCATTCGTTTTGCTGCTTCAGAAAGATCAGTGTACGAACTTAGCCTTTTGCTAATGCCTTTGTCGGTGATTCAGATTCAGTACCTTCCAATTGTGGAGCAAAGTCCGTGTTGTTTCGTTGCTGCTGGAACAGATGAAGATATGAGGAGTTCGCACTTGAAGAGGCAGGAAAAAAGCGATGCCCACGTCGACGAAGATAGAAGCAAAAAGAGCCCATGTATGGACAAACATGTTCTGCTGTTTCCACCTGCCTCTGAATCAACTAGCGCTATAGGGGCATGGGAGCATTTTAAAGTGGGTCTATTTCATGAAATTGATCACACCAGGCTCTCACCAATATCCCCAGTGCAACTAAAATCTGTTCGCATTGTAATGGTCAGTGACATAGGGGAGCACCTGGTGTCGCTAAGGTACCCAAGCCTCCAATCACTTCGCATGCACTTCAGCGACCAAAACTTTGGGAAACAAGACGGCAAGACGATCCCTGCGCTCGACGAGAAATACGTGATGGGGATGGACTTCGCCATCAAAGCGCTTTCCAGAAGCATCCCAACTGAGGAATTTGCACAAAGAAGAAACTCTTGGAGCTTCTGGGTCTCTCCTTCTAAAGAAAACACCCAAGACCCCGAGAATCCAGCTCTCACTGACGCCGCAAGGAGCCTCATTTCCAAGCAGGGTTCTTGCTGGACTCAGCTCAAGTTCACAGGGATGATGCAGTGGGGAAAACGCCGGCAAGTTCGGTTCTTGGGCCGCCATGAAGAGGCAAAGGTTCAATCTTTACCGGAACCACGTAAGGGAAAGATGGCCAGCGTTGAACTCAGAGAAGGAACTAGTGAGAAGAAAAGGAAGGAAGGCGAAGAGGAAATGGAGGCTACCAAGGAAGAGTCTTTCGGGGATATGAGGATGACGCGTCAATGTAGGCAAAGTCATCAAAACGTGAGTAGCAGTGGAGTTAAAAAATCTAAGAAAGCAAAGAATGATCCCAAGAAGCAACAACTCGTGCTTTACAACAAAAACAAGCGGAAAATCTCTATTGGAAGATGGTCTGCTGATAGGTATATGATGGCAGAGGAGAACATGTTAAAGGTTATGAAAGAAAAAAGAGCTGCGTATGGGAACCCAATATTGAGGCCAGATTTAAGATCAGAAGCACGAAAGTATATTGGTGATACGGGTCTGCTCGATCATTTGCTGAAGCACATGGCTGGAAAAGTGGCACCAGGAGGAGCTGAGAGATTCCGACGGCGTCACAATGCTGAGGGCGCAATGGAATACTGGTTAGAGAGTGCTGATCTTGTTGAAATGAGGAAGGAAGCAGGGGTACAAGACCCTTATTGGACTCCTTCCCCAGGATGGAAGCTTGGGGACAGCATTTCACAAGATTACGTTACTGCTAGTGAACTAAGAGAGATCAAAGAAGAAATACTCAAGTTGAAACAAGATATGCGAGAGCTCGCAATGAAGAAGGGAGAGGAGGTATTGGCCATTGAGACTACTCCTAGCTCATGTTTGTCTAGTCTGAATTCGGAAGACTATGGTTCCTTCGCTCCAAAGGAGGAGATTTATGCGGAGTTGGTGAGTAAGAAGGCTAAAATAGAGGAACAATTGAAGGAAATTTCAGTGACTCTGAGTTGTATGGAGGAGAAACTTAGAATGCTAAAACCAACAATGGTGGAGGAACAAATAATGTCAGAATCGGAAACACCCCAAGCCTTTTCTCCAGGACCAACATCAGTAAACATAGGAGGGGAGACAAGGAAGGAAAAGAAAAGCTACAAGAACAAAGCAACAAACTCAGCGGATACACAGATGCAGAAAAACAACAGTGCAGCAGAGAACAAGACGGCAAAGATTGAAAGGCTGAAAAGTGGCTTTCAAATTTGCAAGCCTCAAGGAACCTTTGTGTGGCCAAATATAGGTTTGTCTCCCCACGTTGTGGCCAACCATGATGACCAAACAGTGGTCCCTACGCCACCATCAGCTTCCTCTTCTACCACCTCAGCCCCAAAGCTCATTTTCAAACCCCAGCCTCAGCACCTACCATTACAAGTCCTAACCCGTCCTTCTTCCCCAGTGAAACCACTCGCAGAGAGGCGCCCTGTGAGCACAGCTACTTTGACACATGTCACTGGCCCATTCTCCCCTCATCTTTCTCCTCCATCAGGTACTCCATTATCCAAAATCACCACCACCATCACTATTAACCTCAACGAAGCCCCTCTCACCCTAGACTAG 2268 0.4647 MHLKRFRDLLLFIRFAASERSVYELSLLLMPLSVIQIQYLPIVEQSPCCFVAAGTDEDMRSSHLKRQEKSDAHVDEDRSKKSPCMDKHVLLFPPASESTSAIGAWEHFKVGLFHEIDHTRLSPISPVQLKSVRIVMVSDIGEHLVSLRYPSLQSLRMHFSDQNFGKQDGKTIPALDEKYVMGMDFAIKALSRSIPTEEFAQRRNSWSFWVSPSKENTQDPENPALTDAARSLISKQGSCWTQLKFTGMMQWGKRRQVRFLGRHEEAKVQSLPEPRKGKMASVELREGTSEKKRKEGEEEMEATKEESFGDMRMTRQCRQSHQNVSSSGVKKSKKAKNDPKKQQLVLYNKNKRKISIGRWSADRYMMAEENMLKVMKEKRAAYGNPILRPDLRSEARKYIGDTGLLDHLLKHMAGKVAPGGAERFRRRHNAEGAMEYWLESADLVEMRKEAGVQDPYWTPSPGWKLGDSISQDYVTASELREIKEEILKLKQDMRELAMKKGEEVLAIETTPSSCLSSLNSEDYGSFAPKEEIYAELVSKKAKIEEQLKEISVTLSCMEEKLRMLKPTMVEEQIMSESETPQAFSPGPTSVNIGGETRKEKKSYKNKATNSADTQMQKNNSAAENKTAKIERLKSGFQICKPQGTFVWPNIGLSPHVVANHDDQTVVPTPPSASSSTTSAPKLIFKPQPQHLPLQVLTRPSSPVKPLAERRPVSTATLTHVTGPFSPHLSPPSGTPLSKITTTITINLNEAPLTLD 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00457 755 MobiDBLite consensus disorder prediction 265 342 - -
Vian5g00457 755 MobiDBLite consensus disorder prediction 576 591 - -
Vian5g00457 755 Coils Coil 479 499 - -
Vian5g00457 755 MobiDBLite consensus disorder prediction 576 624 - -
Vian5g00457 755 PANTHER PROTEIN DYAD 106 721 IPR044221 GO:0007131|GO:0051177|GO:0051321
Vian5g00457 755 MobiDBLite consensus disorder prediction 61 80 - -
Vian5g00457 755 MobiDBLite consensus disorder prediction 313 330 - -
Vian5g00457 755 MobiDBLite consensus disorder prediction 265 312 - -
Vian5g00457 755 MobiDBLite consensus disorder prediction 607 623 - -
Vian5g00457 755 Coils Coil 529 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00457 Vian-Chr5 12274821 12278925 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00457 358 439 PHD Transcription Factor Family AT5G22260 43.529 3.28e-06 48.5