Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00416 ATGAACAAAATCATTATACTTCTTTTGGACAACATGATATCGATGGAGAAGACGGGCATATTAATTAATTGCTTTTCCCTTGAGGGTCAACTTGCAAAATTAGAATTATTTGGATTACGGGCATTTCAACTTCTTCAAAAGATACTTCATCCTGTTGGAGGTATTTCAGAGAATCATTGGCAATTAAAGAAACATATAGTGATTGAAGAAGGGTGTGTTTCTCAGAATAGAAATTCAACCACACTGAAAAATGGAGATAGTTTTTCTTCTTGTGCTATGTTACCTCTTAATGTTAAGGATCCTCGAGAATTGCCATGGAAGAGGAATGTTGTTCCAGTGGAGCACATTTCAACTAAGACTTTGAGTAATGCATCGGAAACAAAGTGCAAAGAGCTTGCTGAACTGGGAGGAATTTTGGAAGAGAACAAAGATTTATGTTCATTATCATGGTCAAATCCTGAAGATTGCCAGTCTAATGTTGATGATCTATGGTATGCTACTGCCAGAGGGTTGAGGCCCCCAGTGGAAGACAGTGTCCTTTCCAAGGAGAAACATCATGAACGAATGGTTAATTTCTGCCTTGTTGATACAGATTCTGGAGATGCCAGCACTTCAACTAAGCTGCAGAGCTCCAGATCTTGCCGTATTCTTCTTTTGAAAAATGATGTGAAGGAATTGAGCATTGGATGGTCCGTTATACTTCCCTTAAGTTGGGTCAAAGCTTTCTGGATTCCGCTTATCTCCAATGGGGCACATGCAATAGGTTTGCAAGAGAAGCATTGGATTACATGTGAAATAGGGCTACCAGTTTTCCCTTCAGATTTTCCAGATTGTAAGGCATACTCTTGTTTAATGGAAGAAAAAGAAGCTGCATTTAATAAAAAAGAAGAACTTCGTCCTCCATCCATAAGGCATTTGAGAGTTCCAATCCAACCTCCATGGGGTATTGTTCGCGTTACTTTTGACAAAATGATTAGTTCAATGAAGACTCCTGATCTTTCAACAAGGGAAGATTTGACCAACTTCAGTTCATTACCAAATCCTTACCCTGGTAGCTTTAAAATCTCAAACTCTGACTCTTGGAGTAATTCGTTTAATGGAACTGTAGTTAGGACAGGTTCTATGCTGACCACATTCCTCCATGAAACCAAAGTCGGTCAGTTGTTATTGTTTCCTTACGCAACAGATGGAGAGGCTAGAATCTCCAAGTTTATTAATGGAGAACTAAAGCTTGATCCAAGGTATACAAGCTCTGACATATGTGACCATAAGCCATCTTTTCTAAGAGTTCATCTTCGTCCATTCAAGGAAGGATGTTTTGAAGAGGGTGCAGTTATTTGTGCACCATATCCTTCTGATATATTTTTATGGACTTCAAGTTCAGAGATAAATGAAGAGGGACTTCAAATGTCTCAGTCTGCTATGCGATTATACTTCAAAGAACATTCCTCTGGTAGATGGGAAATGCAGATACCAGATGATTCTATTGCTAGCAAATCTCACCGGTGGCCTATTGGCTTTGTCACAACAGGATCTGTTCAAGGAAGCAAGAGTCTTGTAGCTGAGGGCTTTTGCGAGGCTGTTTTACTATCTCATTTAAGAGAGGAACAGTGGAAGGAGATGCCTATGAAAAAGAGGAGAGAAATATATGTACTTGTCAGGAATTTGAGATCTACAGCTTATAGACTTGCTCTTGCCTCTATCATTCTTGAATACAAGGAAAATGACATTGAGTTCTTGTAA 1743 0.3907 MNKIIILLLDNMISMEKTGILINCFSLEGQLAKLELFGLRAFQLLQKILHPVGGISENHWQLKKHIVIEEGCVSQNRNSTTLKNGDSFSSCAMLPLNVKDPRELPWKRNVVPVEHISTKTLSNASETKCKELAELGGILEENKDLCSLSWSNPEDCQSNVDDLWYATARGLRPPVEDSVLSKEKHHERMVNFCLVDTDSGDASTSTKLQSSRSCRILLLKNDVKELSIGWSVILPLSWVKAFWIPLISNGAHAIGLQEKHWITCEIGLPVFPSDFPDCKAYSCLMEEKEAAFNKKEELRPPSIRHLRVPIQPPWGIVRVTFDKMISSMKTPDLSTREDLTNFSSLPNPYPGSFKISNSDSWSNSFNGTVVRTGSMLTTFLHETKVGQLLLFPYATDGEARISKFINGELKLDPRYTSSDICDHKPSFLRVHLRPFKEGCFEEGAVICAPYPSDIFLWTSSSEINEEGLQMSQSAMRLYFKEHSSGRWEMQIPDDSIASKSHRWPIGFVTTGSVQGSKSLVAEGFCEAVLLSHLREEQWKEMPMKKRREIYVLVRNLRSTAYRLALASIILEYKENDIEFL 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00416 580 PANTHER RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 12 568 IPR039182 GO:0000172|GO:0001682|GO:0005655
Vian5g00416 580 Pfam POPLD (NUC188) domain 229 304 IPR012590 -
Vian5g00416 580 ProSitePatterns Neurotransmitter-gated ion-channels signature. 264 278 IPR018000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00416 Vian-Chr5 10796592 10802382 Dispersed