Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00404 ATGTTGGAAGTACCATTGAAGATGGCTCTTCGGTTTCCCAATTTGGATTTGAAGTCTTTGCCCTTTGCCCAGAACCTCAACCCTGAACTTCTCGGTGGCGTCGTTGCTCTTCTTGCTCTTGGCTTCACCGCTGCTTATATTAGCTATCGTACCAAACACCCCAAAGGATGTTTGGATCCCAAAAATTTCAAAGAATTTAAACTCGTAAAGAAGACACAGCTGAGCCACAACTCTGCAAGATTCAGATTTGCCCTTCCTACTCCTTCTTCAATATTAGGTCTTCCTGTTGGAAACAACATACTTGTTAGAGGAAGAGATAGCCAAGGAGAAGAAGTTCTGAGATCATATACTCCAATCACGTTGGATTCAGATGTTGGGTACTTCGAGTTGGTTGTGAAGGGACGTTTCAGTTACAAACCTGGCCAAGTTAGGGCATTGGGAATGATTGCAGGAGGCTCAGGCATAACTCCTATGTTTCAGCTCATAAGAGCCATTCTAGAAAACCCTAAAGACAAAACAAAGGTGCACCTCATTTATGCCAATGTAACAGTGGATGACATTTTATTGAAGGAAGAACTAGATAATTTTGCCGACAAATTTCCTCAAAGATTTGAAGTATATCATGTTCTTAATAAGCCTCCTCAACAATGGAATGGTGGCATTGGGTTTGTATCGAAGGAGATGATTAAATCACATTGCCCTGAACCAGCAAAAGATATTCAGATACTAAGGTGTGGTCCACCAGCAATGAACACAGCCATGGCTACTCACCTTGATGCACTTGGCTACACATCAGACATGCAGTTCCAATTCTAA 816 0.4203 MLEVPLKMALRFPNLDLKSLPFAQNLNPELLGGVVALLALGFTAAYISYRTKHPKGCLDPKNFKEFKLVKKTQLSHNSARFRFALPTPSSILGLPVGNNILVRGRDSQGEEVLRSYTPITLDSDVGYFELVVKGRFSYKPGQVRALGMIAGGSGITPMFQLIRAILENPKDKTKVHLIYANVTVDDILLKEELDNFADKFPQRFEVYHVLNKPPQQWNGGIGFVSKEMIKSHCPEPAKDIQILRCGPPAMNTAMATHLDALGYTSDMQFQF 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00404 271 Pfam Oxidoreductase NAD-binding domain 148 254 IPR001433 GO:0016491
Vian5g00404 271 Pfam Oxidoreductase FAD-binding domain 66 134 IPR008333 -
Vian5g00404 271 Gene3D Translation factors 56 148 - -
Vian5g00404 271 FunFam NADH-cytochrome b5 reductase 130 271 - -
Vian5g00404 271 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 185 196 IPR001709 GO:0016491
Vian5g00404 271 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 147 166 IPR001709 GO:0016491
Vian5g00404 271 PANTHER NADH-CYTOCHROME B5 REDUCTASE 53 133 IPR001834 GO:0016491
Vian5g00404 271 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 134 266 IPR039261 -
Vian5g00404 271 SUPERFAMILY Riboflavin synthase domain-like 55 135 IPR017938 -
Vian5g00404 271 Gene3D - 149 260 IPR039261 -
Vian5g00404 271 CDD cyt_b5_reduct_like 66 271 - -
Vian5g00404 271 FunFam NADH-cytochrome b5 reductase 56 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00404 Vian-Chr5 10018195 10023979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00404 46 271 NADPH P450 reductases AT5G17770 61.111 1.07e-113 327