Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00271 ATGGAATCTGTTAAGCCATCAGCAGTGACACCAAACAAAAACAAGTTGGCTCGCACATTTGCCAAAGTTCTTCACGTTAGAGCAGTGACAGGAATTGCACCAGTTGATGGACTGAAGAACGTTAAAGGGGATGCAGATCTCCAAAATGAAGGAAATATAATCAAAGAAGATGAAGAGCTTCAGGAAAGAAAGGCCACAGAAGCTTTGCTTGCAAAAGCATTTGCTAGCATTTCAACGGTGAAAGCTTCTTATGCTCAGCTGCAGCATGCTCAGTCTCCCTATGACCCTGATGTAATTCAAGCTGCTGATGAATTGATAGTCTCAGAGTTCAAGACCTTGTCTGAGCTAAAGAAATGTTTCTTTAAAAAGCAATTTGATCCTTCACCAGATAGAGCAATTCTTCAAGCTAAATTGAAGGAGCTGGAGAGTGTGAACAAAACATTTGAGATCACAGGGGAGAAGTTAGAATCACAGGCTCGGCTCAAGGAATCTGAGATTATATTTCTTCAAGAAAAGCTAGAGGAGGCTACCAAGCAAAGCAGGTCAATTGAGAAGAGGTTAAATCAAAGTGGATCATTATCAGTTCTTGACAACCTCCACATTTCAGGATTAAGTCCTAGTCATTTTGTTACTGTTCTTCGCCACACCGTTAGGTCCATTCGAAACTTTGTGAAGTTGTTAGTGAATGAGATGAGATCTGCAGATTGGGACATTGATGCTTCAGTGAATGCCATTATCGAGCAGAATGTGGTGTACTGGAAAGAAGATCACAAATGTTTTGCAATTGAGTCCTTTGTGTGCAGGGAGATGTTTGATTCTTTCAACTTCCCTAACTTCTCCCTACCCAATGAATCCCTGCCAGATAAAAACAAGAGGCAACTGTTCTTTGGGAGGTTCAACGAGCTAAAACCAGTGAAAGCAATGGAGTTTCTTTCAGGGAAGCCAAGATCACCCTTTGCAAAATTCTGCAGGATCAAGTTCTTGAGACTTGTTCATCCCAAGATGGAGGCATCATTCTTTGGCAACGTGAATCAGAGGAACATGCTGAATGGTGGAGAGTTTCCTGACACCAACTTCTTCACCTCATTTGCTGAGATGGCCAAGAGGGTGTGGCTTCTACACTGCTTGGCCTTCTCCTTTGAGCCTCAAGCTTCAATCTTTCAAGTGGAGAAGGGTTGTAGATTATCTGATGTGTACATGGAGAGTGTGAGTGAAAATGATGAAGAAATGGCAGTGGAATCTGAGCCACGTGTTGCTTTCACTGTTGTTCCAGGCTTTAGGATCGGTAAAACTCTAATACAGTGCCAAGTCTACCTCTCACAAGTCATGGTAAAAAAATCCACATTTAGAGAGCAAAAAAGGTAG 1365 0.4212 MESVKPSAVTPNKNKLARTFAKVLHVRAVTGIAPVDGLKNVKGDADLQNEGNIIKEDEELQERKATEALLAKAFASISTVKASYAQLQHAQSPYDPDVIQAADELIVSEFKTLSELKKCFFKKQFDPSPDRAILQAKLKELESVNKTFEITGEKLESQARLKESEIIFLQEKLEEATKQSRSIEKRLNQSGSLSVLDNLHISGLSPSHFVTVLRHTVRSIRNFVKLLVNEMRSADWDIDASVNAIIEQNVVYWKEDHKCFAIESFVCREMFDSFNFPNFSLPNESLPDKNKRQLFFGRFNELKPVKAMEFLSGKPRSPFAKFCRIKFLRLVHPKMEASFFGNVNQRNMLNGGEFPDTNFFTSFAEMAKRVWLLHCLAFSFEPQASIFQVEKGCRLSDVYMESVSENDEEMAVESEPRVAFTVVPGFRIGKTLIQCQVYLSQVMVKKSTFREQKR 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00271 454 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 12 440 IPR040225 GO:0009639|GO:0009959
Vian5g00271 454 Coils Coil 138 186 - -
Vian5g00271 454 Pfam Plant protein of unknown function (DUF641) 62 186 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00271 Vian-Chr5 5841604 5842968 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00271 5 5841604 5842968 Vian5g00271 5 5841604 5842968 ECH