Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00188 ATGGATGATGTAGTAGCAGTTGCCGCCTTTTGTTTTGGCCGAAATATCGGCATAAACATGAGTATTGGGTTGGATTGGCTTAGCCATCCAAATACCATATTGCTTTTGATGAATGCTGATGCCCTGAGCCATTGCGGATATAGAGTACCTTTTGCCTGTGTTATTATGGACACCAACACCAATATGAAAACTCAAAGATGGAAATTGCCAGAGTTTCGTAAACGTTTTATGAAACAATGCTTGGAAGGTGTAGTGAATCAAAGTGATGAACCTTCGACATCTGGGCTTGTTCGACAACTGGAAAGATTTGAGCTGAAACTGAATGGTGCTGCGGACAATGAGGCTGAGTACTGTCATTGGTTATCTAAAAAGACAAAGGAACTATTTTCACAACCACCAATGAATGCTGAATCCAAACCTTGTCTCTCAAACTCTAATGCCTCAGGGGAAGTCTTCCCTGCTCAAGAAACTGGAAAATCTGCAAATACGGATTGGAAGGAGCAGGTTTACCAAGAGATTCAAAAGATGAATAGTGCCTATTTTTCAAAAGTTTATGTCTCTTATCTAGAGATGAATAAGGCGCTTCAACAGCTTGCGTCTTTTCCTCAAGGATCAAATACAAATCTTTTGGAAAAACTGATAAAGAAAATGAAACAAACAGAATGTGTTTTGGCACTCTTCAAATTGAAGAAATGCCAAATAACCACCGATACCAAGAAGATTCTAGATGAAGCAGAAAAGTTTGTAGAATCTAATTTTTCCCCAAAGAATGTTTCTTCCCATCATCAAGGTCCATCACATTCTGGTATTTCTCCATTGAAAATAATTGAAACGAAACCATCACAACAAGCATGGGAAACACAGAACTACTATATAAGGAAGGATGTTTCTGGGGAAAACAAGCCCTGCTTAAAAGAGAAGCAAGTGAAAATAATGGAAACGAAACCATCAACTCAAGTATTGGGAACACAGAATTTTCATATATGGAAGGATGTTTCTCAGCAAACCAAGCCGCAGCAAGCGAAAATAATAGAAACGAAATCATCAGCTCAAGTATTGGGAGCACAGAATTTTTATATATGGAAGGATGTTTCTCAGCAAACCAAGCCGCAGCAAGAAAAAATAATAGAAACCAATCCACCAACTCAAGTATTGGGAACACAGAATTTTCAAATATGGAAGGATGTTTCTCAGCAAATCAAGCCGCAGCAAGAGAAAATAATAGAAACGAAAACATCAACTCAAGTATTGGGCACACAGAATTCTCAGCAAGCGAAAATAATAGAAACGAATCCATTACCCCAACCATTGGGAACACAGAATTCCTGTATATGGAAGGATGTCTCTCATCAAAACAAGCCATGCTTAAAGGAGCAGCAATTAAAAATAGTAGAAGCGAAACCATCAACACAACAATTGGGACCACAGAACTCTAGTATATTGAACCTTGTTTCTCAGCAAAACAAGCCATGCTTAAAAGAGCAGCAAGTGGAAAAACAATATAGGAATTTCCCACAGCATGTAGATCAAGTGTCTAACATGAAAGGTCCTGACAATGCCGTACAGAAGCAAGCCCAAGGTTCAGAGAAAGCAAGTGAAGCATTGAGGGTCAGTGTAAACAGTCTGGAGACTTCAGCTTCACCCTTGACAGAAAACTGCAATAAGCTTAAAGAATTTTCTGATAAATCTACGCTGAATTTTGATGAGCCAAGTGATGAAGTGAAGCGCATTCTTAAAGTGTTAGCCGTCATATCACCTGAAGCATTGAGCGCATCAGTTAATGAAATGAGAGACGCAGTCTATTTGAATGATGTGATGGCAACTTCAGAGTTCTTAGATGAACCACGAGAGATGGTTCAACAACAAAACCAACCGGACCTCATTGCACAAACTGGGAAAAGTGAGGCATTTTCACAAGCTGGTAGGAAAAGGTCTCGAAGCCACAGTTTCAACCAGTTGTCTGATGCTGAGGAACCTGACTGGACTTCAGTCGCATATAAAAAAAAGAAGCCAAGAATTTTGGAAAATTCTTCTCTTTTAGAAGAATTAAAGGAGATCAACCATCGATTGGTAGACAGTGTGATTGTTGTTGGAGAAAATGTCAGCTTTCTTAAAGCGCCGGGAGTAGCGGCTGAGGATAGTGAAGGGTTGGTTATCGAATTCCTTTTCAATGCAGTATCGTTCAATATGAACGTAGAATCTCATACTTTTGCAGATAAAAAGTCAATAATCAAACCATTAAGGTTGTTCGTTCCTACAAATTATCCAACTTCTTTGCCTGTTATTGTAGACAAAGAGCTGTCAGAAGTCAGTACTGAATGCCAGAAAGACCTATCAACAATAGCAAAATCAAAGCTGATTCGCTTTCTGAGATGCTTGGATCGGACATGGTCACTTGAGGATATAGCAATGTCATGGGAACGTTGTGCCAGAGAAACAGTTCTTGAGTGTGCAAAAACCTTTGGAGGAGAAACTTTTAGCTCAATATATGGAGAGTGGGAAAATTATCAAACTGAAGTCATGTCTTGA 2529 0.3922 MDDVVAVAAFCFGRNIGINMSIGLDWLSHPNTILLLMNADALSHCGYRVPFACVIMDTNTNMKTQRWKLPEFRKRFMKQCLEGVVNQSDEPSTSGLVRQLERFELKLNGAADNEAEYCHWLSKKTKELFSQPPMNAESKPCLSNSNASGEVFPAQETGKSANTDWKEQVYQEIQKMNSAYFSKVYVSYLEMNKALQQLASFPQGSNTNLLEKLIKKMKQTECVLALFKLKKCQITTDTKKILDEAEKFVESNFSPKNVSSHHQGPSHSGISPLKIIETKPSQQAWETQNYYIRKDVSGENKPCLKEKQVKIMETKPSTQVLGTQNFHIWKDVSQQTKPQQAKIIETKSSAQVLGAQNFYIWKDVSQQTKPQQEKIIETNPPTQVLGTQNFQIWKDVSQQIKPQQEKIIETKTSTQVLGTQNSQQAKIIETNPLPQPLGTQNSCIWKDVSHQNKPCLKEQQLKIVEAKPSTQQLGPQNSSILNLVSQQNKPCLKEQQVEKQYRNFPQHVDQVSNMKGPDNAVQKQAQGSEKASEALRVSVNSLETSASPLTENCNKLKEFSDKSTLNFDEPSDEVKRILKVLAVISPEALSASVNEMRDAVYLNDVMATSEFLDEPREMVQQQNQPDLIAQTGKSEAFSQAGRKRSRSHSFNQLSDAEEPDWTSVAYKKKKPRILENSSLLEELKEINHRLVDSVIVVGENVSFLKAPGVAAEDSEGLVIEFLFNAVSFNMNVESHTFADKKSIIKPLRLFVPTNYPTSLPVIVDKELSEVSTECQKDLSTIAKSKLIRFLRCLDRTWSLEDIAMSWERCARETVLECAKTFGGETFSSIYGEWENYQTEVMS 842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00188 842 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 15A-RELATED 148 828 IPR044661 GO:0003713|GO:0031490
Vian5g00188 842 MobiDBLite consensus disorder prediction 617 647 - -
Vian5g00188 842 MobiDBLite consensus disorder prediction 617 654 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00188 Vian-Chr5 3753009 3757107 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00188 5 3753009 3757107 Vian5g00188 5 3753009 3757107 ECH