Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00187 ATGAGGAAGAAGCTCGATACCCGTTTCCCTGCTGCTCGGATAAAGAAGATAATGCAAGCAGATGAGGATGTTGGAAAGATAGCACTGGCTGTTCCTGTTTTAGTTTACCGCTTCTTGCTTGTTTCTCTTATATATGTTGTTGACACTGCTCTTAAATGGATTTCAGCTAAAGCTCTAGAACTATTTTTGCAAGATCTTTGTGACCGTACTTATGAAATAACTCTTCAAAGAGGAGCAAAGACCATGAATTCGTTGCATTTGAAACATTGTGTACAAAGCTATAATGTCTTTGACTTTCTGAGGGACGTTGTTAGCAGAGTTCCTGATTACGGTCATGGTCATGGCCATGCTGAGGCTGGTGCTGATGATCGGGCCATTTCAAAAAGAAGGAAAGCTGTTGGTGATGATTGTAATGACAGTGATGAAGAGGTTAAGAGAAGCAAGATGCAAGAGTTGAGCCACACTGGCAGTACTGGTAGGGGAAGAGGCCGGGGTAGAGGTAGAGGCCGTGGCCGAGGGCGACCACCTTTAGTAAGAGACACATATCATCAGGATGCTGAATCTGAGCCATGCCCCTCTGTTCAGCCGAGCAACCAACAAAGTGCTATCCCAAGTGTTGCAGTGGACAGTGGTTCTGAGTCAAAAGATATACCAAAGGAGGAGAATGTTGCAGCTCCTGTTGTAAGCGCTGATTCACTCCGAAACATTGACCTGAATGCCATTACGAATGAAAATGATGACAAAAAAGCTAGCGTGGCAGAACCTCCTTCAACAGAGGGCAAGCATGAAGAGATTCTGGGGTGGCCCCTTTCTGATGTGGACAAGATGGCCATTGATTCGACACAGCTTGCGCAGCTGAGTAGGCCATTAGAAGAGGAGGAGGAAGATTATGACGAGGAGGAGGGGTAA 909 0.4587 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVYRFLLVSLIYVVDTALKWISAKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYNVFDFLRDVVSRVPDYGHGHGHAEAGADDRAISKRRKAVGDDCNDSDEEVKRSKMQELSHTGSTGRGRGRGRGRGRGRGRPPLVRDTYHQDAESEPCPSVQPSNQQSAIPSVAVDSGSESKDIPKEENVAAPVVSADSLRNIDLNAITNENDDKKASVAEPPSTEGKHEEILGWPLSDVDKMAIDSTQLAQLSRPLEEEEEDYDEEEG 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00187 302 MobiDBLite consensus disorder prediction 188 208 - -
Vian5g00187 302 MobiDBLite consensus disorder prediction 130 150 - -
Vian5g00187 302 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 138 - -
Vian5g00187 302 MobiDBLite consensus disorder prediction 241 263 - -
Vian5g00187 302 MobiDBLite consensus disorder prediction 282 302 - -
Vian5g00187 302 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 40 IPR003958 -
Vian5g00187 302 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 56 91 IPR003958 -
Vian5g00187 302 FunFam dr1-associated corepressor homolog 1 106 - -
Vian5g00187 302 SUPERFAMILY Histone-fold 4 116 IPR009072 GO:0046982
Vian5g00187 302 Gene3D Histone, subunit A 1 92 IPR009072 GO:0046982
Vian5g00187 302 MobiDBLite consensus disorder prediction 130 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00187 Vian-Chr5 3718153 3722583 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00187 1 288 CCAAT-HAP5 Transcription Factor Family AT3G12480 46.078 7.48e-71 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00187 5 3718153 3722583 Vian5g00187 5 3718153 3722583 ECH