Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00186 ATGAGAGCATCAACCTCTTCAATTCCCATTCCATCGTCGTCTTCGCGTTTCTCCATCTTCTTCTTCCTTCTATTCGCGCTCCTCGCCCTTCGATCTTCATCCGGCGACTGCTCCCACTTCCAACACCAGGCACCGATGGCCACTGTCGGAGGCGTGCGTGACTCCCCAGGGTCTCAGAATAGCGTCGACACTGAATCTCTCGCGCGATTCGCGGTCGACGAGCACAACAAGAAGCAGAATTCGCTTCTGGAGTTTGCTAGGGTTGTGAAGGCACAGGAACAGGTTGTTGCTGGTACCGTGCATCACCTTACTCTCGAGGCTATTGAGGCTGGTGAGAAGAAGCTCTATGAAGCTAAGGTATGGGTGAAACCATGGCTGAACTTCAAAGAACTTCAAGAGTTCAAGCCTGCCGGTGTTGCATCACCATTTACCTCTGCTGACCTTGGTGTCAAAAAGGATGGCCACAAATCGGGATGGCAATCTGTGCCAACACATGACCCTCAAGTTCAAGATGCAGCAAATCATGCAATCAAGACAATCCAGCAAAGGTCTAATTCATTAGTACCCTATGTGCTTCATGAGGTTGCTGATGCAAAGGCTGAGGTGATTGATGATTTTGCCAAGTTTAATCTGCTTCTCAAAGTCAAACGGGGAGACAAGGAAGAGAAGTTCAAGGTAGAAGTACACCAGAACAACGAAGGGGCACTCCATCTAAATCAGATGGAACAAGATCATTCCTAA 741 0.4885 MRASTSSIPIPSSSSRFSIFFFLLFALLALRSSSGDCSHFQHQAPMATVGGVRDSPGSQNSVDTESLARFAVDEHNKKQNSLLEFARVVKAQEQVVAGTVHHLTLEAIEAGEKKLYEAKVWVKPWLNFKELQEFKPAGVASPFTSADLGVKKDGHKSGWQSVPTHDPQVQDAANHAIKTIQQRSNSLVPYVLHEVADAKAEVIDDFAKFNLLLKVKRGDKEEKFKVEVHQNNEGALHLNQMEQDHS 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00186 246 SUPERFAMILY Cystatin/monellin 45 138 IPR046350 -
Vian5g00186 246 FunFam Cysteine proteinase inhibitor 156 245 - -
Vian5g00186 246 Gene3D - 46 142 - -
Vian5g00186 246 FunFam Cysteine proteinase inhibitor 46 144 - -
Vian5g00186 246 CDD CY 50 136 IPR000010 GO:0004869
Vian5g00186 246 SUPERFAMILY Cystatin/monellin 154 233 IPR046350 -
Vian5g00186 246 Gene3D - 150 242 - -
Vian5g00186 246 ProSitePatterns Cysteine proteases inhibitors signature. 93 106 IPR018073 -
Vian5g00186 246 PANTHER CYSTATIN FAMILY MEMBER 40 193 IPR027214 GO:0004869
Vian5g00186 246 Pfam Aspartic acid proteinase inhibitor 64 136 IPR000010 GO:0004869
Vian5g00186 246 SMART CY_4 47 137 IPR000010 GO:0004869
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00186 Vian-Chr5 3711756 3715864 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00186 5 3711756 3715864 Vian5g00186 5 3711756 3715864 ECH