Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00184 ATGGCCGCCACGCCTCCTTCTTTTTCCCCCTCTCGCACCACCTGCGCCTCTCTCCTCCGCGAATTGCAGATGATATGGGATGAGATTGGGGAGAGTGACAATGATAGAGACAACATGCTTCTTCAACTGGAGCAAGAATGCCTGGACATCTATCACCGGAGAGTTGAGGAGACGAGGATGCACAAGGCTGACATGTATCAGTGGTTGGCAGATGCTGAAGCTCAAGCAGCTAATCTCGTTTCTTCCCTTGGGGAATCTACGGTGCTCCCACGGGGAAAGGGATCCTTGAAGCAGCAAATAGCTACTATTAGACCTGTCTTAGAGGATTTGAGGTCAAAGAAGGATGAAAGAATCAAGGAATTTTTAAAGATAAAGTCCCAAATTTCTCAGATATGTGATGAAATAGCAGGTTGTGGACAGTACAAAAGTGTCACAGACTCAGATGTTAATCAAAGTGATCTGTCATCAAAGAAATTGGGGGAACTAAAGTCGCATCTACAGGAGCTTCAGAATGAAAAGATATTACGTCAGCAGAAAGTGAAGAGTCATATCAGTACTATTAGTGAGCTTACAGAAGTCATGTCAATTGATTTTATGAAGACATTAAATGAAATTCACCCAAGTCTGGATGATTCATTAAAAGGTACACTACAGAGCATCAGCAATGACACGCTTGCAAGATTAACCGGGGTTATTCATTCATTAAAGAGGGAGAAGCAACAAAGGCTACAAAAGGATGAAAATCGATATAGTGCGGTAAGAGGAGCGCACAAAAATTTGAAACGCGCTGAGAAAGCTCGGATTCTTGTCAGCAAGATACCATCAGCTATTGTCGAGAATTTGACTGCAAGAGTGAAAGCGTGGGAAATGGAAAAAGGAATACCTTTCTTGTATGAAAAGATACCATTGTTACATAGCTTGGATGAATATATTGTCCAACGACGACTCAGAGAAGAAGAGAAACGCAAACATCGGGAGCAGAAACGGCTACAAGAACAAGCAGCTGTAGAGCAAGAGGCACTTTTTGGTTCAAGGTCTGCAACAAAGAAGCCTCTGTGTCAGAGCAACAATGCCAACACCATAGCAGGGACACCAACCGGCCGTAGACTGCTTACTCCATCTGGACGCCATGGAACCTCTGGAGGAAAGGAACGCAGAGAAAGTGGCAGACAGAGTGAACCCCATAATTCCAGTGAACTATGTTGCTCTTCCAAAAGATGA 1221 0.4398 MAATPPSFSPSRTTCASLLRELQMIWDEIGESDNDRDNMLLQLEQECLDIYHRRVEETRMHKADMYQWLADAEAQAANLVSSLGESTVLPRGKGSLKQQIATIRPVLEDLRSKKDERIKEFLKIKSQISQICDEIAGCGQYKSVTDSDVNQSDLSSKKLGELKSHLQELQNEKILRQQKVKSHISTISELTEVMSIDFMKTLNEIHPSLDDSLKGTLQSISNDTLARLTGVIHSLKREKQQRLQKDENRYSAVRGAHKNLKRAEKARILVSKIPSAIVENLTARVKAWEMEKGIPFLYEKIPLLHSLDEYIVQRRLREEEKRKHREQKRLQEQAAVEQEALFGSRSATKKPLCQSNNANTIAGTPTGRRLLTPSGRHGTSGGKERRESGRQSEPHNSSELCCSSKR 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00184 406 Gene3D - 222 344 - -
Vian5g00184 406 MobiDBLite consensus disorder prediction 379 393 - -
Vian5g00184 406 Coils Coil 313 336 - -
Vian5g00184 406 Pfam Microtubule associated protein (MAP65/ASE1 family) 245 351 - -
Vian5g00184 406 Pfam Microtubule associated protein (MAP65/ASE1 family) 17 245 - -
Vian5g00184 406 MobiDBLite consensus disorder prediction 348 367 - -
Vian5g00184 406 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 11 245 IPR007145 GO:0000226|GO:0008017
Vian5g00184 406 MobiDBLite consensus disorder prediction 345 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00184 Vian-Chr5 3694222 3703699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00184 245 378 EF-hand Containing Proteins AT5G62250 39.865 1.09e-14 73.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00184 5 3694222 3703699 Vian5g00184 5 3694222 3703699 ECH