Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00182 ATGATCAACCAGAAGAAGCTCGTTGATGAAGTGTCGGGTTGGCTTAGAGTCTACGATGACGGTTCGGTAGACCGAACATGGACCGGTCCACCAGAGGTTAAATTCATGGTCGAACCGGTTCCTGCCCACCACGAATTCATCAATGGAGTTGCTGTTCGTGATACTGTCACGAACAACAATCTCCGTGTACGACTTTACTTGCCGGAGAAAGTCTCTAACGAGGAGAAGCTTCCCCTTTTTCTTCACTTTCATGGTGGCGGGTTTTGCATAAGTGAACCGGATTGGTTCATGTACTATCAGTTTTACTCACAACTTGCTAGGTTAGCTCGAATCATCGTTGTGTCTTGTTTTCTTCGCCGTGCTCCAGAAAATCGTCTTCCTGCAGCAATCGACGACGGGTTTTCTGCTCTTCTCTGGCTACAGGATGTAGCTGGAAGAGAAACGGAAGAGCCGTGGCTTGAAAAACACGGTGATTTTCGTCGTGTTTTTCTGATCGGAGATAGCTCCGGTGCAAATATTGTGCATGAAGTGGCAGCTCGAGCTGGGAAGACACAACTGAAGCTGATAAGCGTAGCTGGAGGAATCCCTATTCATCCGGGGATGATGAGGTCGACACGGAGCAGGTCAGAGTTGGAAAAACCACAATCTCCATTTTTGACTTTGGACATGGTGGATAAGTTCATGAGCTTGGCATTGCCATTGGGTTCAACCAAGGACCATCCCATTGCGTGCCCCATGGGTGACAGCGCTCCGCCGCTGAGCGGGCTGAAACTGCCGCCGTTTCTGCTGTGCCTGGCGGAGATGGACTTGATCTTTGATACAGAGATGGAGTACTACGAAGCCATGCGGAAGGCCAACAAGGATGTGGAGTTGTTTGTTAACGAAGGAGTGACTCATAGTTTCTATCTCAACAAAATTGCAGTGGACATGGACCCAAATACCGGTGCTCAAACGCATGCTCTTATGGCTAGAATCAAACAGTTCGTTGAAGAGCACTAA 999 0.4875 MINQKKLVDEVSGWLRVYDDGSVDRTWTGPPEVKFMVEPVPAHHEFINGVAVRDTVTNNNLRVRLYLPEKVSNEEKLPLFLHFHGGGFCISEPDWFMYYQFYSQLARLARIIVVSCFLRRAPENRLPAAIDDGFSALLWLQDVAGRETEEPWLEKHGDFRRVFLIGDSSGANIVHEVAARAGKTQLKLISVAGGIPIHPGMMRSTRSRSELEKPQSPFLTLDMVDKFMSLALPLGSTKDHPIACPMGDSAPPLSGLKLPPFLLCLAEMDLIFDTEMEYYEAMRKANKDVELFVNEGVTHSFYLNKIAVDMDPNTGAQTHALMARIKQFVEEH 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00182 332 PANTHER ARYLACETAMIDE DEACETYLASE 9 303 - -
Vian5g00182 332 Gene3D alpha/beta hydrolase 5 330 IPR029058 -
Vian5g00182 332 SUPERFAMILY alpha/beta-Hydrolases 7 330 IPR029058 -
Vian5g00182 332 Pfam alpha/beta hydrolase fold 81 302 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00182 Vian-Chr5 3608577 3609575 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00182 7 330 Carbohydrate Esterase AT5G16080 36.036 2.64e-57 187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00182 5 3608577 3609575 Vian5g00182 5 3608577 3609575 ECH
Vian11g01100 11 17281736 17282746 Vian5g00182 5 3608577 3609575 PCT