Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00181 ATGGTGACTTTTGTTCTGGGGACAGCAGAAGAGGCCACAGAAAATCCATCGAATAACAAAGCTGTTGATGCAGAAAATGTAGTTAGTGGTGATCATGCAGAGATTCCAAGTAGTAGTGCAATCAAGGGCACAGAAGTTCCTAAAGAAACCTCTGCCAAAGAAAGAGAATATTGTCTTCCTAGTGAAGCAACTGAGATACTGAAATCATTGGCAGCTAAATGGGAGAATGTAATCGATGTCAATGCATTGCAAGTAATCCCTCTTAAAGGGGCAATGACAAATGAGGTTTTCCAGATCAAATGGAAGACAACAGAAGGAGAATCCTCAAGAAAGGTTCTGGTACGAATCTATGGTGATGGTACTGCTATTTTCATTGATAGGGATGTTGAGGTCAAGACGTTTGAATTTATGTCAAAGAGTGGACAAGGGCCTCGTTTGCTAGGAAGGTTTGATAATGGTCGTATTGAGGAATTCATCCACGCAAGGACATTATCAGCATCTGATCTGCGAGATCCATCCACTTCTGCTCTTATAGCAGCCAAAATGAAGGAGTTTCATGATCTTGATATGCCTGTTCCAAAGACTGTGAACCTTTGGGATAGGTTAAGAGATTGGCTTAAGGAAGCCAAACGCTTGAGTTCTCCTGAAGATGTTGAAGCATTTAAATTGAACAGTTTGGACAAGGAAATATCTACTTTGGAACAAGAATTAACAGGAACTAAGCAATGCATAGGATTTTGTCACAACGATTTGCAATATGGCAACATAATGCTTGATGAAGAGTTCTGTTCTGTCACCCTTATAGATTATGAATATGCAAGTTACAATCCTGTGGCATATGATATAGCAAACCACTTCAATGAGATGGCTGCCAATTATCACACAGATACCCCACATGTTCTTGACTTCACTAAATACCCTGGTGAGCAACCTAGTGACACTGAAGTACAACAATTGCTTGATGAAGTTGAGAAGTATGCACTTGCAAGCCATCTATTGTGGGGCATTTGGGGAATAATTTCGGTGCATGTAAATAAAATTGACTTTAAGTACAGAGAATATGCAGAACAGAGGTTCCAACAGTATTGGTCAAGGAAAACTTCTGTTGTGAGCTCTAATGGCCCTTCCCATGGGTTGCAAGCAGCAACATCGACCACTCACCATAAATCTGATCGAAACACTAGAGCAAGGTTTGGCAGAATTTGTTCCTCGATTGACCTTGATGAGTTAAATGGGAATAGTAGTGAGAAAGTATAG 1257 0.4041 MVTFVLGTAEEATENPSNNKAVDAENVVSGDHAEIPSSSAIKGTEVPKETSAKEREYCLPSEATEILKSLAAKWENVIDVNALQVIPLKGAMTNEVFQIKWKTTEGESSRKVLVRIYGDGTAIFIDRDVEVKTFEFMSKSGQGPRLLGRFDNGRIEEFIHARTLSASDLRDPSTSALIAAKMKEFHDLDMPVPKTVNLWDRLRDWLKEAKRLSSPEDVEAFKLNSLDKEISTLEQELTGTKQCIGFCHNDLQYGNIMLDEEFCSVTLIDYEYASYNPVAYDIANHFNEMAANYHTDTPHVLDFTKYPGEQPSDTEVQQLLDEVEKYALASHLLWGIWGIISVHVNKIDFKYREYAEQRFQQYWSRKTSVVSSNGPSHGLQAATSTTHHKSDRNTRARFGRICSSIDLDELNGNSSEKV 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00181 418 MobiDBLite consensus disorder prediction 373 393 - -
Vian5g00181 418 MobiDBLite consensus disorder prediction 373 387 - -
Vian5g00181 418 Gene3D Phosphorylase Kinase; domain 1 71 158 - -
Vian5g00181 418 Gene3D - 118 363 - -
Vian5g00181 418 MobiDBLite consensus disorder prediction 1 22 - -
Vian5g00181 418 Pfam Choline/ethanolamine kinase 109 309 - -
Vian5g00181 418 PANTHER CHOLINE/ETHANOALAMINE KINASE 51 370 - -
Vian5g00181 418 CDD ETNK_euk 83 365 - -
Vian5g00181 418 SUPERFAMILY Protein kinase-like (PK-like) 55 366 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00181 Vian-Chr5 3603701 3606555 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian5g00181 49 373 Acyl Lipid Metabolism Gene Families AT1G74320 61.290 1.29e-159 452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00181 5 3603701 3606555 Vian5g00181 5 3603701 3606555 ECH