Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00161 ATGGAAGAAGAGAATGCCATAGAGCTTCTCCAGAGATACAGGAGGGACAGAAGAGTTCTTCTTGATTTTATACTTTCAGGGAGCTTAATCAAGAAAGTTGTAATGCCACCTGGTGCAGTTACACTGGATGATGTGGATCTAGATCAAGTCAGTGTTGATTATGTCCTCAACTGTGCAAAAAAGAGTACAATGCTTGAACTTTCAGAAGCAATTAGAGATTATCATGATCATACTGGGTTACCACAAATGAGTGATACAGGTTCAGTCGGTGAATTTTATTTGGTCACTGATCCTGAGTCTTCAGGTTCACCTCCCAGAAGGCCGCCACCAACTGTTCCTGTTTCTGCAGTGCCTCCTGTAGCTGTTTCCATTCCTTCTGTTTTTCCACCATCCCCAATTCTATCTAGTGTATCGAGATCTGAGTCTTTTGACACTACTCAAGAAAAGGAGCTAACTGTGGATGACATTGAAGATTTTGATGATGATGATGATGTTTCAGTTGTTGAAGGCGTTAGAGCTAAAAGGACTCTTAATGATGCTTCAGATCTTGCAGTGAAATTGCCTTCCTTCTCCACAGGCATATCAGATGATGATCTTCGTGAAACTGCGTATGAGATCCTCTTGGCCTGTGCTGGAGCCACAGGGGGTCTGATTGTCCCATCAAAGGAAAAAAAGAAAGATAAAAAATCCAGCTTGATCAGGAAGCTTGGGCGTAGCAAAAGTGGAAGTGTTGTATCCCAGTCTCAGAGTGCTCCTGGATTAGTTGGCTTGCTGGAAACCATGCGAGTTCAAATGGAGATATCCGAGTCAATGGATATTAGAACCAGACAAGGCTTGCTAAATGCTCTTGTGGGTAAGGTGGGGAAAAGGATGGATACTCTATTGGTTCCTTTGGAGTTGCTTTGCTGTATTTCACGTTCAGAATTTTCTGATAAGAAGGCGTTTATACGCTGGCAAAAGCGGCAGTTAAAAGTTTTGGAGGAGGGGCTTGTTAATCACCCTGCTGTTGGATTTGGTGAATCTGGACGCAAGACAAACGAGTTGAGGATTCTGTTGGCCAAGATTGAAGAAGCAGAGTTTCTCCCATCTTCAAGTGGTGAACTTCAAAGGACAGAATGCTTGAGATCCCTAAGGGAGATTGCAATTCCACTTGCTGAGCGGCCAGCTCGGGGTGACTTAACTGGTGAAATATGCCATTGGTCAGATGGTTATCACTTAAATGTCAGACTATACGAGAAGTTACTTTTAAGCGTGTTTGACATGCTTGATGAAGGAAAACTGACAGAGGAAGTGGAGGAAATTCTTGAACTTTTGAAGTCAACATGGAGAGTTTTAGGAATCACGGAGACAATCCATCACACTTGCTATGCATGGGTTTTATTTCGTCAGTATGTTATCACAAGGGAGCATGGGGTTTTATTGCATGCACTTGAGCAATTAAATAAAATACCACTAATGGAGCAAAGAGGCCAACAAGAGAGGTTGCACTTGAAAAGCTTGCGTTCCAAGGTTGAGGGTGAACGGGATCTATCTTTCTTACAGTCTTTCTTAACACCAATTCAGAGATGGACGGACAAGCAGCTTGGAGATTACCATATGCACTTCAACGAGGGTTCAGCAACTATGGAAAAGATTGTAGCAGTTGCAATGATTACCAGGAGGCTTCTACTGGAAGAACCAGAAACTACTTCACAATCCCTGCCAATTAGTGATCGTGATCAGATAGAGATATATATATCATCATCAATTAAGAATGCATTTTCAAGGACAGTGCAAGTTGTTGAAAGAACTGATATGTCAAACGAGCATCCCTTGGCATTGCTTGCAGAAGAACTCAAGAAGCTCCTAAAACGAGAATCTGTAAATTTCTTGCCTGTTTTATCTCAAAGGCATCCTCAAGCAACTGTTGTATCTGGATCACTAGTTCACAAACTTTATGGGCTCAGACTGAAACCCTTTCTGGATGGTGCAGAGCATTTAACCGAGGATGTCATTTCTGTATTCCCTGCAGCTGAAAGTCTAGAGCAGTTCATAATGGCACTTATTGCATCTGTATGCCATGAAGAAAATGCCGAGATCTTGTTGAAGAAATTGAATCTCTATCAGATTGAGACAAAATCTGGAACATTGGTGTTACGTTGGGTCAATTCACAGCTTGGAAGAATTTTAGGTTGGGTAGAGCGGGTTTTTCAACAAGAGCACTGGGACCCAATATCTCCTCAACAGCGGCATGCTGGTTCTATTGTGGAAGTTTACAGGATTATTGAGGAGACAGTTGATCAATTTTTTGGTCTCAAAGTTCCAATGAGGTTTACAGAATTGAATAGCTTGTTTCGGGGCATTGACAACGCTCTTCAAGTGTATGCAAATAATGTTGTTAATGACTTGGCCAGCAAGGAGGATCTAATACCACCAGTGCCTATTCTCACACGGTACAAAAAGGAAGCTGGAATAAAGGCTTTTGTAAAGAAGGAACTGTTTGATACTCGTGTGCCTGAGCCTGATGAGTTAAAGCCTAGCCAAATTAGTGTCCTAACAACTCCAACACTTTGCGTTCAATTAAATACATTATACTATGCCATTAATCATCTGAATAAATTGGAAGACAACATCTGGGAGCGATGGACAAGTAAAAGGTCCATTGAAAAACTCATAAAGAAATCCTTAGATGGGAAGTCCAAAAGTTTTTCCCAGAAGGATACTTTTGAGGGAAGTAGAAAAATCATAAATGCTGCTATGGACCGCATTTGTGAGTACACAGGAACTAAAATTGTCTTTTGTGATCTGAGAGTTCAATTTATGGACAATTTGTACAAACCCAGTGTCTCTGGCTATAGGTTGGACGCACTTATAGAGCCACTTGATATGGAACTTAGCCAACTTTGTGATATTGTTGTGGAGCCTCTGAGGGACCGCATAGTGACTAGTCTTCTTCAGGCATCATTGGATGGCTTACTCCGTGTTATCTTAGATGGGGGTCCATCAAGAGTTTTCTTTCCCAGTGATGCAAAATTATTAGAGGAAGATTTGGAGATCTTAAAGGAATTCTTTATATCAGGAGGGGATGGGCTCCCTCGGGGTGTGGTCGAAAATCAGGTTGCACGTGTTCGGCATGTGATCAAGTTGCATGGCTATGAGACGCGAGAGTTGATTGATGACTTGAAATCTGCTAGTGGCATGGAAATGCAAGGTGGAAAAAGCAAACTGGGAACTGATTCCAAAACTCTATTAAGAATATTATGCCACAGGAGTGACTCAGAAGCCTCTCAATTTCTGAAGAAACAATACAAAATACCCAGTTCTTCTGTATGA 3312 0.4173 MEEENAIELLQRYRRDRRVLLDFILSGSLIKKVVMPPGAVTLDDVDLDQVSVDYVLNCAKKSTMLELSEAIRDYHDHTGLPQMSDTGSVGEFYLVTDPESSGSPPRRPPPTVPVSAVPPVAVSIPSVFPPSPILSSVSRSESFDTTQEKELTVDDIEDFDDDDDVSVVEGVRAKRTLNDASDLAVKLPSFSTGISDDDLRETAYEILLACAGATGGLIVPSKEKKKDKKSSLIRKLGRSKSGSVVSQSQSAPGLVGLLETMRVQMEISESMDIRTRQGLLNALVGKVGKRMDTLLVPLELLCCISRSEFSDKKAFIRWQKRQLKVLEEGLVNHPAVGFGESGRKTNELRILLAKIEEAEFLPSSSGELQRTECLRSLREIAIPLAERPARGDLTGEICHWSDGYHLNVRLYEKLLLSVFDMLDEGKLTEEVEEILELLKSTWRVLGITETIHHTCYAWVLFRQYVITREHGVLLHALEQLNKIPLMEQRGQQERLHLKSLRSKVEGERDLSFLQSFLTPIQRWTDKQLGDYHMHFNEGSATMEKIVAVAMITRRLLLEEPETTSQSLPISDRDQIEIYISSSIKNAFSRTVQVVERTDMSNEHPLALLAEELKKLLKRESVNFLPVLSQRHPQATVVSGSLVHKLYGLRLKPFLDGAEHLTEDVISVFPAAESLEQFIMALIASVCHEENAEILLKKLNLYQIETKSGTLVLRWVNSQLGRILGWVERVFQQEHWDPISPQQRHAGSIVEVYRIIEETVDQFFGLKVPMRFTELNSLFRGIDNALQVYANNVVNDLASKEDLIPPVPILTRYKKEAGIKAFVKKELFDTRVPEPDELKPSQISVLTTPTLCVQLNTLYYAINHLNKLEDNIWERWTSKRSIEKLIKKSLDGKSKSFSQKDTFEGSRKIINAAMDRICEYTGTKIVFCDLRVQFMDNLYKPSVSGYRLDALIEPLDMELSQLCDIVVEPLRDRIVTSLLQASLDGLLRVILDGGPSRVFFPSDAKLLEEDLEILKEFFISGGDGLPRGVVENQVARVRHVIKLHGYETRELIDDLKSASGMEMQGGKSKLGTDSKTLLRILCHRSDSEASQFLKKQYKIPSSSV 1103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00161 1103 ProSiteProfiles Munc13-homology domain 2 (MHD2) profile. 944 1054 IPR014772 -
Vian5g00161 1103 ProSiteProfiles Munc13-homology domain 1 (MHD1) profile. 665 806 IPR014770 -
Vian5g00161 1103 Gene3D - 707 899 - -
Vian5g00161 1103 PANTHER PROTEIN UNC-13 HOMOLOG 19 1101 IPR008528 -
Vian5g00161 1103 MobiDBLite consensus disorder prediction 93 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00161 Vian-Chr5 3226779 3244685 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00161 5 3226779 3244685 Vian5g00161 5 3226779 3244685 ECH