Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00148 ATGGCTGCTTCGGTGGCAGGGAACGCGACCACGAACACGAACGCGGGTGTGGAGTGGCACGTGCGTCCTCCAAACCCTAAGAACCCAATCGTCTTCTTCGATGTCACCATCGGCAACATACCTGCTGGTCGAATCAAGATGGAACTCTTCGCCGACATTGCGCCCAAAACCGCCGAGAATTTCAGATTCTCTCTAATGACAGAATCATCTCCAGATCAATTGATGAATTTGGCTTATGTTATTTGGCAGGCAGTTCTGCACTGGGGAGTACAGGGTGGTGTTGCTTTCTTGGCTTTCAGACTTTGTTTTCATGATTGCCATAATGGTAGTATTTCTAAAAAAGCTGGACTTCCGGTTGGTTACAAGGGTTGTCAATTTCATAGAGTGATTAAGGATTTTATGATTCAAGCTGGCGATTTTGTAAAGGGTGATGGTAGTGGATGTGTTTCAATTTATGGACTTAAGCTTGATGATGAAAACTTTATTGCCAAACACACTGGCCCCGGCCTTCTGTCGATGGCAAATAGTGGACCAAATACCAATGGTTGTCAGTTTTTTATAACATGTGCAAAATGCGACTGGCTTGACAACAAGCATGTCGTTTTCGGGAGAGTGCTTGGAGATGGCCTTTTGGTTGTAAGGAAGATTGAGAACGTGGCAACTGGACCCAATAACCGGCCAAAATTAGCTTGCGTCATTGCAGAATGTGGTGAAATGTAA 720 0.4514 MAASVAGNATTNTNAGVEWHVRPPNPKNPIVFFDVTIGNIPAGRIKMELFADIAPKTAENFRFSLMTESSPDQLMNLAYVIWQAVLHWGVQGGVAFLAFRLCFHDCHNGSISKKAGLPVGYKGCQFHRVIKDFMIQAGDFVKGDGSGCVSIYGLKLDDENFIAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGRVLGDGLLVVRKIENVATGPNNRPKLACVIAECGEM 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00148 239 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 31 239 - -
Vian5g00148 239 SUPERFAMILY Cyclophilin-like 26 239 IPR029000 -
Vian5g00148 239 FunFam Peptidyl-prolyl cis-trans isomerase CYP19-2 99 239 - -
Vian5g00148 239 Gene3D - 18 239 IPR029000 -
Vian5g00148 239 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 32 238 IPR002130 GO:0000413|GO:0003755
Vian5g00148 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 197 212 IPR002130 GO:0000413|GO:0003755
Vian5g00148 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 49 64 IPR002130 GO:0000413|GO:0003755
Vian5g00148 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 169 184 IPR002130 GO:0000413|GO:0003755
Vian5g00148 239 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 184 196 IPR002130 GO:0000413|GO:0003755
Vian5g00148 239 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 237 IPR002130 GO:0000413|GO:0003755
Vian5g00148 239 PIRSF Peptidylpro_ismrse 8 94 IPR024936 GO:0003755
Vian5g00148 239 PIRSF Peptidylpro_ismrse 100 239 IPR024936 GO:0003755
Vian5g00148 239 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 121 138 IPR020892 GO:0003755|GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00148 Vian-Chr5 2750092 2754021 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00148 5 2750092 2754021 Vian5g00148 5 2750092 2754021 ECH