Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00137 ATGTCTGAATTGGTGGCGCGTACGGGGCGGCATCAGCAGCGCTACGAGAACGGTTATCGGCTTGTTGCTGGGTGTGTTCCATTTAGATATAAAAGTTCTAATGGTGACTCCGGTTCCGAGAAGATTGTTCAAGTGCTTATGATTAATTCACCAAGTGGACCTGGGCTTTTGTTTCCAAAGGGAGGTTGGGAGAATGACGAAACTGTTGAGGAGGCAGCTGCAAGGGAAGCTGTAGAAGAAGCAGGAGTTCGAGGAGACCTAATGGATTTTCTTGGATATTATGAGTTTAGGAGTAAGACCCATCAAGATGAGTTTAGTCCAGAAGGTTTATGTAGAGCAGCAATGTTTGCCTTGTTTGTGAAGGAGGAACTGGAGTTTTGGCCTGAGCAAAGCACCAGAAATCGGAGTTGGCTAGATGTATCGGAGGCACTTGAAACCCTCCGCCATGCATGGATGAGGGATGCCCTGGAAGGCTTCTGTAAATGGCACGAGGATAAGTTGAATGAAACGACAGGATGA 519 0.4721 MSELVARTGRHQQRYENGYRLVAGCVPFRYKSSNGDSGSEKIVQVLMINSPSGPGLLFPKGGWENDETVEEAAAREAVEEAGVRGDLMDFLGYYEFRSKTHQDEFSPEGLCRAAMFALFVKEELEFWPEQSTRNRSWLDVSEALETLRHAWMRDALEGFCKWHEDKLNETTG 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00137 172 Pfam NUDIX domain 45 157 IPR000086 -
Vian5g00137 172 ProSitePatterns Nudix box signature. 61 82 IPR020084 GO:0016787
Vian5g00137 172 SUPERFAMILY Nudix 10 162 IPR015797 -
Vian5g00137 172 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 161 - -
Vian5g00137 172 ProSiteProfiles Nudix hydrolase domain profile. 18 160 IPR000086 -
Vian5g00137 172 FunFam Nudix hydrolase 16, mitochondrial 5 159 - -
Vian5g00137 172 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 5 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00137 Vian-Chr5 2601978 2605786 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00137 5 2601978 2605786 Vian5g00137 5 2601978 2605786 ECH