Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00133 ATGGACTCTCAGCGCCGCACCGTCCGCACCCTAGTCTCCAAGCTTAGCTCCGTCTCCGAAGCCGCTCGCGTCGACGCCCTCTGCCAGCTTCGCCTCATGTCCAAGCAGGACCCGCAAACCCGACCCGTAATCTCCGAAGCTGGCGCAATCCCTTATATAGCGGAAACCCTCTACTCTTCCTCTCACACTTCCCAAGAGAACGCAGCGGCCACGCTGCTCAACCTCTCCATAACTGAAAAGGAGCCTCTCATGTCGACGCGTGGCGTCCTCGACGCGATCGCACACGTGATCTCGCACCACGTCACCACCTCATCACCCGCCGCCGTACAGTCCGCTGCCGCCACCATACATAGCCTCCTCTCATCCGTCGACGCCTACCGTCCCGTCGTCGGCTCGAAGCGAGAGATCGTGTACTCGCTCGTCGATATCCTCCGTTGCCACGTGTCCTCGCCTCCGCGCACCATCAAGGACGCGCTCAAGGCGCTCTTCGCCATCGCGCTCCACCCGCTCAACCGCGCCACCATGATCAACCTCGGCGTGGTTCCCGCGCTTTTTTCGCTCGTCGTTAAGGATGGTAGGGTCGGCATCGTGGAGGACGCGACGGCGGTGGTTGCGCAGGTTGCGGGATGTGAGGATGCCGCCGAGGCCTTCCGTAAAGCATCTGGCGGCCTCGGCGTGCTCGCCGACCTTCTTGACCTCGCCACTGCCGCCAGCATGCGCACCAAGGAGAATGCCGTCTCGGCTCTCCTCAATCTTGTGCGCTGTGGTGGGGAGAAGGTCGCCGCAGATGTGCGCGACGCGGTGGCGTTCGGAGCGCTGGACGGAATTAGGGACGTTAGGGATGGCGGCAGTGGCAAGGGGAGGACAAAGGCGGCGGAATTGTTGAAGGTCTTGCTCGGTGAGAGCAATGGCACTGTCGATGTGGCGTTGAGTAGTGATAACTGTTCTTCCTTTGGTTCCTCGAGGAATCATGATTCGGATTCAGTTTGGTGA 993 0.6133 MDSQRRTVRTLVSKLSSVSEAARVDALCQLRLMSKQDPQTRPVISEAGAIPYIAETLYSSSHTSQENAAATLLNLSITEKEPLMSTRGVLDAIAHVISHHVTTSSPAAVQSAAATIHSLLSSVDAYRPVVGSKREIVYSLVDILRCHVSSPPRTIKDALKALFAIALHPLNRATMINLGVVPALFSLVVKDGRVGIVEDATAVVAQVAGCEDAAEAFRKASGGLGVLADLLDLATAASMRTKENAVSALLNLVRCGGEKVAADVRDAVAFGALDGIRDVRDGGSGKGRTKAAELLKVLLGESNGTVDVALSSDNCSSFGSSRNHDSDSVW 330
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00133 330 Pfam Armadillo/beta-catenin-like repeat 38 76 IPR000225 GO:0005515
Vian5g00133 330 Gene3D - 2 279 IPR011989 -
Vian5g00133 330 PANTHER U BOX DOMAIN-CONTAINING 7 298 - -
Vian5g00133 330 SUPERFAMILY ARM repeat 7 299 IPR016024 -
Vian5g00133 330 SMART arm_5 210 254 IPR000225 GO:0005515
Vian5g00133 330 SMART arm_5 37 77 IPR000225 GO:0005515
Vian5g00133 330 SMART arm_5 168 209 IPR000225 GO:0005515
Vian5g00133 330 FunFam ARM repeat superfamily protein 2 304 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vian5g00133 Vian-Chr5 2567091 2568083 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00133 5 2567091 2568083 Vian5g00133 5 2567091 2568083 ECH