Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00132 ATGAAAACCTCACCTATGCTCAGTCCTCTGGTGCTCTTCCTCCTCTTCTCCCTAGCCAAAGGGCTGAACCCTAACTGTGATGTCCATGAGCATGGCTCAACCCTTAAAGTGTTCCATGTGTTCAGCCCTTGTTCCCCATTCAGGCCCTCAGAGGGTCTGTCATGGGAAGAGAGTGTCCTACAGCTAGAGGCCAAGGACCAGGCCAGGATGCAGTACCTTTCCAACTTGGTAGCTAGAAGGTCAATTGTCCCAGTTGCCTCGGGCAGACAAATCACACAGAGCCCTACATACATTGTTAAGGCCAAGATAGGTACCCCAGCTCAGACCCTTCTCTTGGCCATGGACACCAGCAATGATGCTGCTTGGGTCCCTTGCACTTCCTGTGTTGGTTGCTCTACACTCAAACCCTTTGCCCCTGCCAAATCCACCTCCTTCAACAAACTTCCATGTTCTGCTCCTCAGTGCAAACAGGTACCAAACCCCACTTGCGGTGGAAGCGCGTGTTCATTCAACTTCACCTATGGCACTTCTTCTGTGGCAGCGGGTCTTGTCCAGGACACGGTTACCCTAGCCACCGACCCAGTTCCAGGCTACACCTTTGGATGCGTTCAAAACGCAACAGGAAGCTCATTTCCAACACAGGGGCTATTGGGCCTGGGCCGAGGCCCATTGTCACTATTGGCCCAAACCCAAAATCTCTACCGATCCACATTCTCCTACTGCTTGCCCAGCTTCAAAACACTCAACTTCAGTGGGTCACTGAGACTTGGGCCTGTGGCCCAGCCCAAGAGGATCAAGTTCACCCCTCTTCTCAAAAACCCTAGAAGGTCATCACTGTATTATGTGAACTTGGTGGCTGTTAGAGTTGGCCGGAGAAATGTTGATATCCCGCCGGAGGCTTTGGCGTTCAACCCCGCCACCGGTGCCGGCACCATTTTCGATTCCGGTACGGTGTTCACCCGGCTGGTTGAACCGGCCTACACCGCCGTCCGGAACGAGTTCCGGCGGCGAGTCAGCGTCGGGAAGAAACTCACCGTGACAAGGCTAGGAGGGTTTGACACATGCTACACGGTCCCCATAGTTGCGCCAACCATAACGTTCATGTTCTCCGGCATGAACGTGACACTCCCGCCGGACAATACCCTCATACACAGCACCGCCGGCAGCATCACGTGCTTGGCCATGGCGGCGGCGCCCGACAACGTGAATTCGGTGCTGAACGTGATCGCCAACATGCAGCAACAAAACCACCGTGTGCTCTACGACGTGCCCAACTCAAGGATCGGTGTTGCTCGTGAACTTTGCACCTAA 1311 0.5446 MKTSPMLSPLVLFLLFSLAKGLNPNCDVHEHGSTLKVFHVFSPCSPFRPSEGLSWEESVLQLEAKDQARMQYLSNLVARRSIVPVASGRQITQSPTYIVKAKIGTPAQTLLLAMDTSNDAAWVPCTSCVGCSTLKPFAPAKSTSFNKLPCSAPQCKQVPNPTCGGSACSFNFTYGTSSVAAGLVQDTVTLATDPVPGYTFGCVQNATGSSFPTQGLLGLGRGPLSLLAQTQNLYRSTFSYCLPSFKTLNFSGSLRLGPVAQPKRIKFTPLLKNPRRSSLYYVNLVAVRVGRRNVDIPPEALAFNPATGAGTIFDSGTVFTRLVEPAYTAVRNEFRRRVSVGKKLTVTRLGGFDTCYTVPIVAPTITFMFSGMNVTLPPDNTLIHSTAGSITCLAMAAAPDNVNSVLNVIANMQQQNHRVLYDVPNSRIGVARELCT 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00132 436 ProSiteProfiles Peptidase family A1 domain profile. 97 431 IPR033121 -
Vian5g00132 436 PANTHER ASPARTYL PROTEASES 18 429 IPR001461 GO:0004190|GO:0006508
Vian5g00132 436 FunFam Aspartyl protease AED3 258 436 - -
Vian5g00132 436 Pfam Xylanase inhibitor N-terminal 97 257 IPR032861 -
Vian5g00132 436 FunFam aspartyl protease AED3 75 257 - -
Vian5g00132 436 SUPERFAMILY Acid proteases 95 435 IPR021109 -
Vian5g00132 436 Pfam Xylanase inhibitor C-terminal 280 429 IPR032799 -
Vian5g00132 436 Gene3D Acid Proteases 258 436 IPR021109 -
Vian5g00132 436 Gene3D Acid Proteases 74 257 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00132 Vian-Chr5 2551655 2554297 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00132 5 2551655 2554297 Vian5g00132 5 2551655 2554297 ECH