Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00130 ATGAACAAAGAGCTTACTGGTTTTGTGAAGGCTTGGGAAGCAGCAGTTAGGAAATCAGCAGGTCCAAAGAAGAGGGCAAGCAGCATCTTCACACCAATGTCTGTTGCCCATGTTGATGATGATGATGATGCAAGGAATGGTGGTGAGGTTTCCGTTACTCAGGTTGAGAAGATTCTCCCCAATGGCGACTTCTACACAGGGCAGTGGCTGGAGAATGGTCCTCATGGCCAGGGAAAGTATCTGTGGACAGATGGATGCATGTATGTTGGGGAATGGCAGAGGGGTGCAATCACGGGGAAAGGACGGTTCAGCTGGCCCAGTGGTGCCACCTACGAGGGTGATTTCAAGAGTGGTTATATGGATGGGAAGGGCACTTACACAGGGTCTTCTGGGGACACCTATAAGGGTTGTTGGGTGATGGAGTTGAGACATGGCCAGGGGACTCAGAGCTACCCCAACGGGGACTTCTATGATGGGGAGTGGAGGAAGGGATTGCAGAATGGGCATGGGAGGTACCAGTGGAAGAATGGGAACCATTACATTGGACAGTGGAGGAATGGTGTGTTCTATGGGAATGGCACCATGATGTGGAGCAATGGGAATAGGTATGATGGTTCTTGGGAAGATGGATTGCCCAGGGGGAATGGCACATTCAGGTGGGGTGATGGGAGTTTCTATGTTGGGGTCTGGAGTAGAGATTCAAAAGAGCAAAGTGGAACATATTACCCTTCTGGCTCTTGTGTTGGCCATTTGGAGTGGGATCCTCAGGAGCTGTTCTCTGTGGACTTGGTGGAGTGCAGTATTTGTGCTTGTGAGAAGGTGGCAATTTACCCTTCACAGAAGAGTTTGAACATTTTGGATGGAGATAAGATGAGTAGAAAAGGAACTGATGTGAATGGTAGGACAAGGTGGAGTTCAGCGGATGCAAGGGTTAGCAATTACAGTTCTGAAGATGGTTCCCATGACGGCTCAAGGACTTCTCACGGTGATAATTCTGTTCCAAGAGTGCCAAATTTGAGGTTGAGGCCTCCAAAGAAACAGGGAGAGACTATTTCTAAAGGGCATAAAAACTATGACCTCATGCTTAATCTGCAGCTTGGTATCAGACATGCTGTTGGAAGACCTGCTCCAAGTACATCTCTTGATTTGAAGTCTTCTGCATTTGATCCTAAAGAAAAAGTATGGACTAAGTTTCCACCAGAAGGATCCAAGCACACGCCACCTCACTCCTCATGTGAGTTTAGATGGAAAGACTACTGCCCGGTAGTGTTCAGGGCTCTTAGAAAATTATTCAAAGTAGATCCTGCTGATTACATGATATCATTATGTGGAAATGATGCCCTTCGGGAGCTCTCATCTCCTGGAAAAAGTGGAAGCTTTTTTTATTTGACAAATGATGACCGCTACATGATAAAGACCATGAAGAAATCAGAAGTAAAAGTTTTCTTAAGAATGCTCCCTGGTTACTACAAACATGTTCGGGCTTTTGAGAACACTCTAGTCACCAAGTTCTTTGGTCTCCACTGTGTTAAGCTAACAGGAACTGCACAGAAGAAGGTTCGATTTGTCATCATGGGAAATCTATTCTGCTCACAATATGCCATCCATAGGCGCTTTGACTTGAAAGGTTCCACCTTTGGTCGCACAACGGATAAACCTGAGTCAGAAATAGAGCCTACAACAACACTTAAGGACCTCGATTTAAATTATATATTTCGGTTGCGGAAATCTTGGTTTCAAGAATTTTGCAGGCAAGTGAACAAGGACTGTGACTTTCTGGAACAGGAGAGAATCATGGATTATAGTATGTTGGTAGGTCTTCACTTTCGAGGAATGTCTTCTTGTGACAATGTTACTCCTCCTTCTGGTTACAGTCCAGGCTCTACAACCCCAACTGGCAATGGTAACATGGGTGATGGAGCGCCCCGTCTTTCTGGAGTGGATGTGGATCATCTTGTTGTAGATCCTAGTCGGTGGATTCAGTTAGGTATAAACATGCCAGCAAGGGCTGAATCGACAGTGCGAAAAAGTTGTGACACCCCTCAGCTAGTTGGACAACCAACCGGTGAGTTATATGAGATCATCATCTTTTTCGGGATCATTGACATATTACAAGACTATGACATCAGTAAAAAGCTTGAGCATGCTTACAAGGCATTCCAATATGATGCAACAACAATCTCTGCTGTTGATCCAAGACTGTACTCTAGACGGTTTCGTGATTTCATCTTCAGATCCTTCTGGTCGCACCCTTTCAACGCCGATTCCGTGACCTCTTTTTTCGTCGATTTCACCGGCTACGTCTCCAAGGCCGCGCAAGCGTCGCTGGATTTTGCCGAGGAGCTCACTGCCTTCGCCGGCGAAGAGACAGCTTTTAACTTGATTGCTCACGTGCTGGAAAATGTCCACATTGAGTCCGAACTTTTGGAGCAGGTTAGGTTAATTGGGAAGAAGCAGCCCTATTCTGCGTTTCGTGGCAAGGGTTTTCATTTGGGGTTTTTGAGTTCTCTGTTTTCGCGTGTGGCCCGCGAATTGGGGGTGGTGGTTTTTGATTCCCTTTCTGCAGATTGTAAAATGATTTGGAATTCAACTGTTGCAATTTTGGGGTTAGCAGATTCTCCAGCACCTGTCATTTTGCCAATCAAATTTCATTAG 2655 0.4588 MNKELTGFVKAWEAAVRKSAGPKKRASSIFTPMSVAHVDDDDDARNGGEVSVTQVEKILPNGDFYTGQWLENGPHGQGKYLWTDGCMYVGEWQRGAITGKGRFSWPSGATYEGDFKSGYMDGKGTYTGSSGDTYKGCWVMELRHGQGTQSYPNGDFYDGEWRKGLQNGHGRYQWKNGNHYIGQWRNGVFYGNGTMMWSNGNRYDGSWEDGLPRGNGTFRWGDGSFYVGVWSRDSKEQSGTYYPSGSCVGHLEWDPQELFSVDLVECSICACEKVAIYPSQKSLNILDGDKMSRKGTDVNGRTRWSSADARVSNYSSEDGSHDGSRTSHGDNSVPRVPNLRLRPPKKQGETISKGHKNYDLMLNLQLGIRHAVGRPAPSTSLDLKSSAFDPKEKVWTKFPPEGSKHTPPHSSCEFRWKDYCPVVFRALRKLFKVDPADYMISLCGNDALRELSSPGKSGSFFYLTNDDRYMIKTMKKSEVKVFLRMLPGYYKHVRAFENTLVTKFFGLHCVKLTGTAQKKVRFVIMGNLFCSQYAIHRRFDLKGSTFGRTTDKPESEIEPTTTLKDLDLNYIFRLRKSWFQEFCRQVNKDCDFLEQERIMDYSMLVGLHFRGMSSCDNVTPPSGYSPGSTTPTGNGNMGDGAPRLSGVDVDHLVVDPSRWIQLGINMPARAESTVRKSCDTPQLVGQPTGELYEIIIFFGIIDILQDYDISKKLEHAYKAFQYDATTISAVDPRLYSRRFRDFIFRSFWSHPFNADSVTSFFVDFTGYVSKAAQASLDFAEELTAFAGEETAFNLIAHVLENVHIESELLEQVRLIGKKQPYSAFRGKGFHLGFLSSLFSRVARELGVVVFDSLSADCKMIWNSTVAILGLADSPAPVILPIKFH 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00130 884 FunFam Phosphatidylinositol 4-phosphate 5-kinase 343 527 - -
Vian5g00130 884 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 151 254 - -
Vian5g00130 884 PANTHER PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE 74 744 IPR023610 -
Vian5g00130 884 SMART morn 109 130 IPR003409 -
Vian5g00130 884 SMART morn 155 176 IPR003409 -
Vian5g00130 884 SMART morn 201 222 IPR003409 -
Vian5g00130 884 SMART morn 63 84 IPR003409 -
Vian5g00130 884 SMART morn 86 107 IPR003409 -
Vian5g00130 884 SMART morn 132 153 IPR003409 -
Vian5g00130 884 SMART morn 178 199 IPR003409 -
Vian5g00130 884 FunFam Phosphatidylinositol 4-phosphate 5-kinase 8 141 185 - -
Vian5g00130 884 Gene3D - 140 190 - -
Vian5g00130 884 Gene3D - 205 277 - -
Vian5g00130 884 Gene3D - 90 139 - -
Vian5g00130 884 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 350 747 IPR002498 GO:0016307|GO:0046488
Vian5g00130 884 MobiDBLite consensus disorder prediction 298 333 - -
Vian5g00130 884 CDD PIPKc_AtPIP5K_like 357 745 - -
Vian5g00130 884 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 59 164 - -
Vian5g00130 884 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 343 527 IPR027484 -
Vian5g00130 884 PIRSF PIP5K_plant 9 340 IPR017163 GO:0005524|GO:0016308
Vian5g00130 884 PIRSF PIP5K_plant 321 750 IPR017163 GO:0005524|GO:0016308
Vian5g00130 884 SUPERFAMILY SAICAR synthase-like 353 747 - -
Vian5g00130 884 Gene3D - 528 745 - -
Vian5g00130 884 Pfam MORN repeat 157 178 IPR003409 -
Vian5g00130 884 Pfam MORN repeat 111 133 IPR003409 -
Vian5g00130 884 Pfam MORN repeat 134 155 IPR003409 -
Vian5g00130 884 Pfam MORN repeat 65 87 IPR003409 -
Vian5g00130 884 Pfam MORN repeat 203 224 IPR003409 -
Vian5g00130 884 Pfam MORN repeat 88 109 IPR003409 -
Vian5g00130 884 Pfam MORN repeat 180 202 IPR003409 -
Vian5g00130 884 MobiDBLite consensus disorder prediction 287 352 - -
Vian5g00130 884 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 443 744 IPR002498 GO:0016307|GO:0046488
Vian5g00130 884 SMART PIPK_2 384 748 IPR002498 GO:0016307|GO:0046488
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00130 Vian-Chr5 2485122 2495286 Dispersed/Wgd