Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00129 ATGAACATGTTAGGCCTCAGAGACTTGGTCCTCATAGCTCCAACCCCTTCTCAACTTCACCACCATCAACACCAACACCAACACCAGCACCAGCACCAACACCACCCCATTTCAGCAGAGCACCATCCCAACCTTGCCTTGCCTTCTCCAGCTTCTCTCAGTGTTGGCCTTGGCATTTTCCCTCTGCTAACCGTTCCACACACCAATGATGTTCATGATCAGGTTCAGGACTGTGCCAACAACACCACCACCACCAACCACAACACCAACTACTGGAACCTCAAGATGTGTGGTGTCTCGGAAGTGAATTCCACCAGAAAAGGTGTCATGAACGTGGAAGATGAGGCGAGCAACAAGCATGTGATGGAGAGTGAGGAAAGTGGTGAGTTTAGGGTGTGCCAGGATTGTGGCAATAGGGCCAAGAGGGATTGCAGCTACAAGAGGTGCAGGACTTGTTGCAAAGGACGTGGCTTTGATTGCAGCACTCACGTGAAGAGCACGTGGGTCCCAGCCTCTCTCAGACGCAGTGGTGGTAACAGTGGTAGTGATGGTAACGGTGATGGAGATGCTGATGCTGGTGCTTCTAAGAGGCTAAGAACAATAGGGTCATCCAAGAATGTTGCAGCTACTTCTCTTAGTTCAACTTCCAATGCTACCCCATCAAAGAGCTTTAGCATAGACACTAGCTCATGTCAACAAGATGCTGGTTTCAAGCAATCTTTGCCACGGCATGTGCGTGCACCTGCTGTGTTTAGGTGCCACAGAGTGTCTGCTATTGGGAGTGGTGAAGATGAGATTGCTTACTTGGCCACAGTGCATATCAGTGGCCATGTGTTCAAGGGGTTTCTGTATGATCATGGTGCTGATGCCAGAAATGATGTGCCTAGTGTCTCTGAACTGCAACTGGGAAACAATGGAAGTGGAAAGAGTAATAATAGGGAATGTTCTTCTGCAATTGGGATTCCAACCAGTGCTTACCCTGCTTCTGTTTGCTGA 996 0.492 MNMLGLRDLVLIAPTPSQLHHHQHQHQHQHQHQHHPISAEHHPNLALPSPASLSVGLGIFPLLTVPHTNDVHDQVQDCANNTTTTNHNTNYWNLKMCGVSEVNSTRKGVMNVEDEASNKHVMESEESGEFRVCQDCGNRAKRDCSYKRCRTCCKGRGFDCSTHVKSTWVPASLRRSGGNSGSDGNGDGDADAGASKRLRTIGSSKNVAATSLSSTSNATPSKSFSIDTSSCQQDAGFKQSLPRHVRAPAVFRCHRVSAIGSGEDEIAYLATVHISGHVFKGFLYDHGADARNDVPSVSELQLGNNGSGKSNNRECSSAIGIPTSAYPASVC 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00129 331 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 21 317 IPR007818 GO:0003700|GO:0006355
Vian5g00129 331 NCBIfam LRP1 C-terminal domain 241 287 IPR006511 -
Vian5g00129 331 NCBIfam putative zinc finger domain, LRP1 type 132 173 IPR006510 -
Vian5g00129 331 MobiDBLite consensus disorder prediction 171 194 - -
Vian5g00129 331 Pfam Domain of unknown function (DUF702) 132 289 - -
Vian5g00129 331 MobiDBLite consensus disorder prediction 17 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00129 Vian-Chr5 2481015 2482525 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Vian5g00129 DUF702 3.1e-52 No_clan