Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00126 ATGGCTTCTTCTTCTTCTTCTTTGGTTGTTGTTGGGCCTCTTAACCTCACTCAACAGAATGGTTACAAAGTGTGGGAAGATCCTTCTTTCATCAAGTGGAGGAAAAGGGACTCTCATGTCACCTTGCACTGCCATGACTCTCTAGAAGGATCTCTCAGATATTGGTATCAACGGAACAAAGTGGATTTTTTGGTTTCCCAGTCTGCTGTTTGGAATGTTGATGCTGTTCAGGGGTCTCTTGATTGTGCTGCATTTTGGGTCAAAGACTTGCCTTTTGTTAAGTCCTTGTCTGGATATTGGAAATTTTTCATCGCTGACAGGCCCAGCAATGTTCCAACTAATTTTTATGAAAGTGAGTTCCACGATTCAGAGTGGAAAAATTTGCCTGTTCCTTCGAATTGGCAGTTACACGGATTTGATGTTCCTATATATACGAACGTGGTGTATCCATTTCCGCTAGATCCTCCTTTCGTTCCAAGTGAAAATCCTACTGGCTGTTACAGAACGTACTTCCAAATTCCTAAAGAATGGGAGGGTAGAAGAATTTTGTTGCATTTTGAAGCAGTTGATTCTGCCTTTTGTGCATGGATAAATGGGAATCCTGTTGGATATAGCCAAGACAGCAGACTTCCTGCAGAGTTTGAAATCACTGAATTTTGTCATCCATGTGGTTCAGATGTTAAGAATGTTTTAGCTGTTCAAGTGTATAGATGGAGTGATGGCTCTTACCTTGAGGACCAGGACCAATGGCGGTTATCTGGTATCCACCGTGATGTTCTTCTTATGGCAAAGCCAGAGGTATTTATTACTGACTACTTTTTCAAATCAAATATCGCTGAAGATTATTCTTACGCAGATATACTGGTTGAAGTAAAATTAGATAGATTAAAAGAGACATCCAAGGATAATATTCTCACAGACTACTCCATAGAAACTACGTTGTTTGATTCTGGAAGCTGGTACACCTCTGATGGCAATCCTGATCTCCTTTCATCTAATGTGGCTGACATAAAGCTCCAACCATCAAGTACACCAGCACCAATATTAGGGTTTCATGGCTACTTGCTTACAGGGAAACTACAATCACCAAAGCTTTGGTCTGCAGAGAAACCATACCTCTATACTCTGGTTGTTGTCCTGAAAGACCGATCTGGCCGTGTTGTTGACAGTGAATCATGTCCAGTAGGATTTAGACTAGTGTCTAAAGCCCATAAACAACTGCTTGTTAATGGACATGCTGTTGTGCTTAGAGGTGTGAACAGGCATGAACATCATCCTCAAGTGGGGAAGGCAAACATAGAATCCTGCATGATCAAGGATTTGGTCTTGATGAAGCAAAATAATATTAATGCAGTGAGGAATAGCCATTATCCCCAACATCCACGTTGGTATGAGCTATGTGATCTGTTTGGCATGTATATGATAGACGAAGCAAATATTGAGACACATGGTTTTGACTATTCTAAACATCTCAAGCACCCTACTTTGGAACCAATTTGGGCATCTTCAATGCTGGATCGTGTGATTGGCATGGTTGAGAGAGATAAAAATCACGCATGCATTATTTCGTGGTCTTTAGGGAATGAATCTGGATTTGGAACAAATCATTATGCTTTAGCTGGCTGGATTCGAGGACGAGATTCATCACGGGTATTACATTATGAAGGAGGTGGATCCAGGACTCCATGCACTGATATTGTGTGTCCTATGTATATGCGTGTTTGGGACATGGTGAAAATAGCCAATGATCCGACTGAAACACGTCCTCTGATACTGTGCGAATATTCACATGCAATGGGAAACAGTAATGGAAATCTTCATATATATTGGGAAGCAATTGACAACACATTTGGACTCCAAGGAGGCTTTATTTGGGATTGGGTTGATCAGGCGCTGGTGAAAGTTTATGAGGATGGTACAAAGCATTGGGCATATGGAGGTGAATTTGGGGATGTTCCCAATGATTTGAATTTTTGTTTGAATGGGCTCACATTTCCTGATCGAACTCCTCATCCTGTTTTACATGAGGTTAAATACTTGTACCAACCAATCAAGGTGGCTTTAAATGAAGGGAAATTGGAGATAAAAAATACTCATTTTTTTCAAACAACAGAAGGATTGGAGTTCAGCTGGTATATTTCTGCAAATGGATATAACCTTGGATCTGGTATTTTGGACCTTGCCCCTATAAAGCCCCAGAATAGTTATGCTGTTGATTGGAAATCAGGTCCATGGTATTCTCTGTGGGCTTCATCATCAGAAGAAGAACTATTCTTGACATTAACGGTTAAACTTTTGGACTCCACACGTTGGGTTGAAGCTGGTCATATTGTTTCATCTGCTCAAGTTCAACTGCCTGACAGGAAAAACATTCTTGTGCATGCTATTGCTATTAGTTCTGGCAAACTGGTTGCTGAAACACAAGGAGATACAATCATAGTCAAAAAGCAAGATGTTTGGGATTTGACATTGAATACTAAAACTGGTTTAGTTGAAAGCTGGAAGGTTAAAGGAGTACATATTTTGAAAAAGGGCATCCTCCCATGTTTCTGGCGAGCTCCTATAGATAATGATAAAGGAGGAGAGGGAGCCAGTTATTTGTCCAGGTGGAAAGCTGCTGGAATGGACTGCCTCCACTTCATTGCTGAGAGCTGTTCTGTGCAAAGTATTACAGAAAACTCAGTTAGAATATTGGTGGTTTTTCTTGGTGTTACAAAGGGTGCTGAGGGTTCTCTCTCTAACCAAGACAAATCAAAGGTATTATATACTACAGAAGTGACATATACAATTTTTGCTTCTGGGGATGTTATTATAGAATGCGAAGTGAAGCCAAATCCTGATCTTCCTCCTTTACCACGTGTGGGAATTGTGTTAAATGTGGAAAAATCATTGGATCTAGTAACTTGGTATGGAAGAGGACCATTTGAGTGTTATCCGGATCGAAAAGCTGCAGCCCAAGTTGCAGTCTATGAACATAATGTTAGTGAGTTGCATGTTCCTTATATTGTTCCTGGGGAATCTTCTGGCAGGGCAGATGTTAGGTGGGCAACATTCAGAAACAAAAATGGTTTTGGAATATATGCTTCTAAGTATGGTATCTCTCCACCAATGCAAATGAGTGCAAGCTACTATAGCACCTCAGAACTTGAACGTGCCACACACAATGAAGAGCTCATTGAAGGAGATAGCATTGAGTTTCATCTGGATCACAAGCATATGGGGTTAGGTGGAGATGATAGTTGGTCGCCATGTGTCCACAATCCTTATTTGATTCCTCCTGTGTCACACTCATTCTCTGTTAGATTGTGTCCTGTAACTCCAGACACTTCTGGGTATGACATCTACAAATCCCAGCTTCAAAACTCTTGA 3369 0.4081 MASSSSSLVVVGPLNLTQQNGYKVWEDPSFIKWRKRDSHVTLHCHDSLEGSLRYWYQRNKVDFLVSQSAVWNVDAVQGSLDCAAFWVKDLPFVKSLSGYWKFFIADRPSNVPTNFYESEFHDSEWKNLPVPSNWQLHGFDVPIYTNVVYPFPLDPPFVPSENPTGCYRTYFQIPKEWEGRRILLHFEAVDSAFCAWINGNPVGYSQDSRLPAEFEITEFCHPCGSDVKNVLAVQVYRWSDGSYLEDQDQWRLSGIHRDVLLMAKPEVFITDYFFKSNIAEDYSYADILVEVKLDRLKETSKDNILTDYSIETTLFDSGSWYTSDGNPDLLSSNVADIKLQPSSTPAPILGFHGYLLTGKLQSPKLWSAEKPYLYTLVVVLKDRSGRVVDSESCPVGFRLVSKAHKQLLVNGHAVVLRGVNRHEHHPQVGKANIESCMIKDLVLMKQNNINAVRNSHYPQHPRWYELCDLFGMYMIDEANIETHGFDYSKHLKHPTLEPIWASSMLDRVIGMVERDKNHACIISWSLGNESGFGTNHYALAGWIRGRDSSRVLHYEGGGSRTPCTDIVCPMYMRVWDMVKIANDPTETRPLILCEYSHAMGNSNGNLHIYWEAIDNTFGLQGGFIWDWVDQALVKVYEDGTKHWAYGGEFGDVPNDLNFCLNGLTFPDRTPHPVLHEVKYLYQPIKVALNEGKLEIKNTHFFQTTEGLEFSWYISANGYNLGSGILDLAPIKPQNSYAVDWKSGPWYSLWASSSEEELFLTLTVKLLDSTRWVEAGHIVSSAQVQLPDRKNILVHAIAISSGKLVAETQGDTIIVKKQDVWDLTLNTKTGLVESWKVKGVHILKKGILPCFWRAPIDNDKGGEGASYLSRWKAAGMDCLHFIAESCSVQSITENSVRILVVFLGVTKGAEGSLSNQDKSKVLYTTEVTYTIFASGDVIIECEVKPNPDLPPLPRVGIVLNVEKSLDLVTWYGRGPFECYPDRKAAAQVAVYEHNVSELHVPYIVPGESSGRADVRWATFRNKNGFGIYASKYGISPPMQMSASYYSTSELERATHNEELIEGDSIEFHLDHKHMGLGGDDSWSPCVHNPYLIPPVSHSFSVRLCPVTPDTSGYDIYKSQLQNS 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00126 1122 Gene3D - 799 1104 IPR014718 GO:0030246
Vian5g00126 1122 SUPERFAMILY Galactose-binding domain-like 90 265 IPR008979 -
Vian5g00126 1122 Pfam Beta-galactosidase, domain 4 693 786 IPR032312 -
Vian5g00126 1122 ProSitePatterns Glycosyl hydrolases family 2 signature 1. 450 475 IPR023230 -
Vian5g00126 1122 Gene3D Immunoglobulins 682 790 IPR013783 -
Vian5g00126 1122 FunFam Glycoside hydrolase family 2 protein 802 1104 - -
Vian5g00126 1122 Gene3D Immunoglobulins 266 398 IPR013783 -
Vian5g00126 1122 FunFam Beta-galactosidase 399 681 - -
Vian5g00126 1122 ProSitePatterns Glycosyl hydrolases family 2 acid/base catalyst. 515 529 IPR023232 -
Vian5g00126 1122 PRINTS Glycosyl hydrolase family 2 signature 588 603 IPR006101 GO:0004553|GO:0005975
Vian5g00126 1122 PRINTS Glycosyl hydrolase family 2 signature 189 204 IPR006101 GO:0004553|GO:0005975
Vian5g00126 1122 PRINTS Glycosyl hydrolase family 2 signature 440 458 IPR006101 GO:0004553|GO:0005975
Vian5g00126 1122 PRINTS Glycosyl hydrolase family 2 signature 515 530 IPR006101 GO:0004553|GO:0005975
Vian5g00126 1122 PRINTS Glycosyl hydrolase family 2 signature 409 423 IPR006101 GO:0004553|GO:0005975
Vian5g00126 1122 Pfam Beta galactosidase small chain 818 1102 IPR004199 GO:0004565|GO:0005975|GO:0009341
Vian5g00126 1122 Pfam Glycosyl hydrolases family 2, sugar binding domain 94 265 IPR006104 GO:0004553|GO:0005975
Vian5g00126 1122 Gene3D - 14 265 - -
Vian5g00126 1122 Gene3D Glycosidases 400 680 - -
Vian5g00126 1122 SUPERFAMILY (Trans)glycosidases 403 682 IPR017853 -
Vian5g00126 1122 Pfam Glycosyl hydrolases family 2 267 398 IPR006102 GO:0004553|GO:0005975
Vian5g00126 1122 SUPERFAMILY beta-Galactosidase/glucuronidase domain 267 398 IPR036156 -
Vian5g00126 1122 SUPERFAMILY beta-Galactosidase/glucuronidase domain 678 788 IPR036156 -
Vian5g00126 1122 SUPERFAMILY Galactose mutarotase-like 800 1105 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vian5g00126 1122 PANTHER BETA-GALACTOSIDASE 18 1118 - -
Vian5g00126 1122 SMART Bgal_small_N_2 813 1103 IPR004199 GO:0004565|GO:0005975|GO:0009341
Vian5g00126 1122 Pfam Glycosyl hydrolases family 2, TIM barrel domain 404 685 IPR006103 GO:0004553|GO:0005975