Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian5g00123 | ATGGCGGAAACCGCAATTTTCTTCGCCGCCACCGGAGAGCCTCCTCTGCTACGATTCTTCAACAGTACCTTTCTCTACGTCAAACGGAACCTCATCGCTCACATTTTCCGCTCCCTAAACGACGCCGTCTCACACCACAGGATTTGCTGTGTCATGGACGCGGCGATCGAGAAAAAGTGTGATGTGTACGCGAGAGATTCTTCGTCGAACGACAGGAGTTTCGGCGCGGACGAGAATGGACGGCACGCCGTTTTCAATGTGCTGGATACTATGCTTAAGGATAGTTTAGAGCGGCTGAAGATGATGAGGGAAAATATATGTTTGGTAAAGATAGGTCTAACTATGGGATATGCTTGTGAATTCAAGTATGCTGAACATACAGCTACTATTAGGAGTTTGTGCTTGGACAGGAAGTTGGGAGCAGCTCTTTGGCTTCGGAGGAAAATGGTTATGAAAGGTGTTGTTCCTGATGTGTTTACCCACAACCATATTGTTAACGGGCTGTGCAAAATTGGTTTTCTGGAGAAAGCAGATTGGATTGTTGGAGAGATGTTAGAAATTGGTCCTGGTCCCAATTGTGCGACTTATAACACTTTGATTAAGGGCTATTGCACTGTAAATGACCTGGACAGGGCTTTGTCTCTGTTCTCCATCATGTCCAATGCTAGGGTTCTGCCAAACAGGGTTACTTGTAGTATACTGGTGCGTGCTCTGTGTGAGAAAGGTCTTCTAAAGGGAGCTAAAAGGATGCTCGAAGAAATATTGAAGGATGATGACGAGAAATATATAACTAATTTAGTAACCTCTACTATATTTATGGATAACTACTTTAAGAAAGGAGCAATTTTTCAGGCTCTTAGTCTTTGGAATCAGATGGTTCAAAATTGTACTAAAGTTGATGTTGTAGCTTATAATGTTCTTATCCATGGCTTTTGCAAGAGTTTACAAATGAACCTTGCATATGGATATACATGCGAGATGTATAAGAAAGGTTTACTTCCTGATGTTTTTACGTATAATATTCTTATTGGTGCTCTTTGCAAGGAAGGTAAAACTAGTGAGGCTTGCTATACCCTTGGAGTCATGTCTAGTATGGGAATTATGCCCGATCAAATTACATACCAGCTTGTGATTCGAGGCCTTTGTTTTGATGGAGAGATTGCTAGAGCAAAAAGCTTGCTTTGGTCTATGTTGAACAATTTAATAGTGCCGAAGCCTTTAATATGGAACCTACTAATTGACTTCTACGGACGATATGATGATCTTAGCAATGCACTTTTTACAAGAAATCAGATGCTAGCTTTTGGTGTTCACCCAAATGTATTTACTTACAATGCTTTAATTCTTGCACAAGTGAAGAGTGACAATTTCAATGGTGCTTGCACTCTGAAGGAAGAAATGCTCTCAAAGGATATTTTTCCTGATGTTGTTACCTATAATTTATTGATAGGTGCCGCCTGTAATTTAGGACGTCCTGATTTTGTTCTTCAATTACATGATGAGATGGTGCAGAGAGGGTATGAACCAGATTTAATAACTTACACTGAAATTGTTAGGGTGTTCTGTATTAGAGGTAAGATGAAAGAGGCAGAGGAGCTATATGCCAAAATACTAAAATCTGGTTTATTGAATGATCATGTTCCAGTGCAGATTCTATTTAACAAGTACTGCAAAATGAAGGAACCAGTTAGAGCATTTAATTTCTATCAAGACTGGTTAGAAAGTAAAAGGGGAAGTCATCCGTATTAA | 1749 | 0.4002 | MAETAIFFAATGEPPLLRFFNSTFLYVKRNLIAHIFRSLNDAVSHHRICCVMDAAIEKKCDVYARDSSSNDRSFGADENGRHAVFNVLDTMLKDSLERLKMMRENICLVKIGLTMGYACEFKYAEHTATIRSLCLDRKLGAALWLRRKMVMKGVVPDVFTHNHIVNGLCKIGFLEKADWIVGEMLEIGPGPNCATYNTLIKGYCTVNDLDRALSLFSIMSNARVLPNRVTCSILVRALCEKGLLKGAKRMLEEILKDDDEKYITNLVTSTIFMDNYFKKGAIFQALSLWNQMVQNCTKVDVVAYNVLIHGFCKSLQMNLAYGYTCEMYKKGLLPDVFTYNILIGALCKEGKTSEACYTLGVMSSMGIMPDQITYQLVIRGLCFDGEIARAKSLLWSMLNNLIVPKPLIWNLLIDFYGRYDDLSNALFTRNQMLAFGVHPNVFTYNALILAQVKSDNFNGACTLKEEMLSKDIFPDVVTYNLLIGAACNLGRPDFVLQLHDEMVQRGYEPDLITYTEIVRVFCIRGKMKEAEELYAKILKSGLLNDHVPVQILFNKYCKMKEPVRAFNFYQDWLESKRGSHPY | 582 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian5g00123 | 582 | SUPERFAMILY | TPR-like | 171 | 574 | IPR011990 | GO:0005515 | |
| Vian5g00123 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 440 | 474 | IPR002885 | - | |
| Vian5g00123 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 510 | 544 | IPR002885 | - | |
| Vian5g00123 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 192 | 226 | IPR002885 | - | |
| Vian5g00123 | 582 | Pfam | PPR repeat | 152 | 177 | IPR002885 | - | |
| Vian5g00123 | 582 | Pfam | PPR repeat | 365 | 396 | IPR002885 | - | |
| Vian5g00123 | 582 | Pfam | PPR repeat | 505 | 533 | IPR002885 | - | |
| Vian5g00123 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 475 | 509 | IPR002885 | - | |
| Vian5g00123 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 300 | 334 | IPR002885 | - | |
| Vian5g00123 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 157 | 191 | IPR002885 | - | |
| Vian5g00123 | 582 | Pfam | PPR repeat family | 191 | 239 | IPR002885 | - | |
| Vian5g00123 | 582 | Pfam | PPR repeat family | 300 | 348 | IPR002885 | - | |
| Vian5g00123 | 582 | Pfam | PPR repeat family | 439 | 488 | IPR002885 | - | |
| Vian5g00123 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 227 | 261 | IPR002885 | - | |
| Vian5g00123 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 370 | 404 | IPR002885 | - | |
| Vian5g00123 | 582 | Gene3D | Tetratricopeptide repeat domain | 411 | 581 | IPR011990 | GO:0005515 | |
| Vian5g00123 | 582 | NCBIfam | pentatricopeptide repeat | 512 | 542 | IPR002885 | - | |
| Vian5g00123 | 582 | NCBIfam | pentatricopeptide repeat | 195 | 227 | IPR002885 | - | |
| Vian5g00123 | 582 | NCBIfam | pentatricopeptide repeat | 477 | 510 | IPR002885 | - | |
| Vian5g00123 | 582 | NCBIfam | pentatricopeptide repeat | 442 | 476 | IPR002885 | - | |
| Vian5g00123 | 582 | NCBIfam | pentatricopeptide repeat | 337 | 370 | IPR002885 | - | |
| Vian5g00123 | 582 | NCBIfam | pentatricopeptide repeat | 302 | 336 | IPR002885 | - | |
| Vian5g00123 | 582 | ProSiteProfiles | Pentatricopeptide (PPR) repeat profile. | 335 | 369 | IPR002885 | - | |
| Vian5g00123 | 582 | PANTHER | RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED | 120 | 400 | - | - | |
| Vian5g00123 | 582 | Pfam | PPR repeat | 408 | 437 | IPR002885 | - | |
| Vian5g00123 | 582 | Pfam | PPR repeat | 267 | 295 | IPR002885 | - | |
| Vian5g00123 | 582 | Gene3D | Tetratricopeptide repeat domain | 257 | 324 | IPR011990 | GO:0005515 | |
| Vian5g00123 | 582 | Gene3D | Tetratricopeptide repeat domain | 185 | 256 | IPR011990 | GO:0005515 | |
| Vian5g00123 | 582 | Gene3D | Tetratricopeptide repeat domain | 325 | 402 | IPR011990 | GO:0005515 | |
| Vian5g00123 | 582 | Gene3D | Tetratricopeptide repeat domain | 76 | 184 | IPR011990 | GO:0005515 |