Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian5g00118 | ATGATGTATAATGATCCGCAGCACCAGCAGCACCAGTACCAGCAGCAGCAGCCGCCGCCGCCGCATTTCCACCACCAGCAGCCGGGTCAGGAGTTCCACCGTGGACCGCCGCCGTCATCACAGGCGCCGCCGGTGATGCGGCAAGGCTCCGCTTCGTCGACGAACCTGGCCCCCGAGTTTCACCACCCCGGCCCCGGAGGACCCCCTCCTCATTACGATGGTTCGATTTTGCTTGTTCTTCCTCCAATTGCTACTTATAATCATGTTCACAGTGATGGCCATGGTGCAAAAAGAATACGAAAGCTTACTCAAAGGAAAGCAGTTGATTATACAAGCACAGTCGTGCGTTATATGCAGGTTCGTATGTGGCAGCGGGATTCAAGGGATAGGACAGTATTGCAGCCTACCCCAGCAGCAGCAATTGATATGTTGCCAGCAGTTGGCTATCCAGACAACCCATCCACAAGCTTTGCTGCTAAATTTGTTCATACATCTCTAAATAAAAATCGTTGCCCCATTAATCGTGTTCTTTGGACTCCAACAGGCCGGCGACTTATTACTGGCTCACAGACTGGGGAATTCACTCTTTGGAATGGACAATCTTTTAATTTTGAAATGATTCTTCAGGCTCATGATCAAGCAATCAGGTCCATGGTCTGGAGTCACAATGACAACTGGATGGTCTCTGGTGATGATGGAGGCGCAATAAAGTATTGGCAGAACAACATGAACAATGTTAAAGCCAACAAATCTGCTCATAAAGAATCAGTCCGTGACTTAAGGACAGATTTGAAGTTCTGTTCATGCTCTGATGATACCACCGTTAAGGTTTGGGATTTTGCACGTTGTCAGGAAGAGTGCTCATTAACCGGTGGGAAAGACAATCTTGTGAAACTTTGGGATGCTAAGACAGGGAAAGAGCTTTGCTCATTTCATGGGCACAAAAATACTGTGCTATGTGTCAAATGGAATCAAAATGGCAACTGGGTGTTAACAGCTTCAAAGGATCAAATAATAAAGAGTACCAATATTCATATGTACCTTGATTTACAGCTTTATGACATTAGAGCCATGAAGGAGCTTGAATCATTCCGTGGACATCGCAAGGATGTTACTGCTTTGGCCTGGCATCCATTCCATGAGGAGTACTTTGTGAGTGGGAGTTATGATGGTTCCATCTTCCATTGGCTTGTTGGGCATGAAACTCCCCAAATTGAAATTTCCAATGCCCATGATAATAACGTGTGGGATCTTGCATGGCATCCTATTGGATACCTTCTATGCAGTGGCAGCAGTGATCATACAACAAAGTTTTGGTGCAGAAATAGGCCAGGAGACACCCTTCGTGATAGATTTAACCCTGGCATGCAAGGATATGCTGATCCAAATCCTATTGCTGGTCGGGTGGGTGGTAATTTTCCAATGGCTGAAGGACCAACAACTCCAGGACCATTTGCCCCTGGGTTAACTCGAAATGAGGGCACCATTCCAGGTGTTGGAGTTGCTATGCCTTTATCTATTCCTTCTCTTGACATGCCTCAAGGGGAGCAGAAGCAGCCACATCCTGTTTCAATGGGTGCTCCACCTCTTCCCCCAGGTCCACATCCCTCTCTTCTTAATGCCAATCAACAACAACCATACCAACAAAATCCTCAGCAGATGCCGCCACAACATCAACACCAAGGTCTACCGCAGCAGATGGGTCCTTTGGCAATGCCTCCAAACATGCCACAATTACAGCATCCTTCACATTCACCCATGGTCCCTCACCAGCATTTACCTCGCCCTCCTCCCCAAATGCCTATTGGCCTGCCAGGATCTATACCAGGGATTTCATCAGTGCCTACATCACATCCGATGCCAATGCCTGGCCCTATGGGGATGCAAGGGGCAATGAATCAGATGGGTACTCCAATGCCACAAGGTCCTTATGTGGGCATGAATCAAATGCATTCAGGATCCTTGCCTACAAGTGGAGGGCCACCACTTGGTGGTTTTCCAGGCAACATGCCTAATATGCAAGGCCCATCAAGTGCCAATTATCCTCAAGGTGCTTCATTTAACAGACCTCAAGGTGGTCAAATGCCTCTGATGCAAGGGTATAATCCTTACCAGTGCGCTAATGGTGGTTACGATTCTTGTTATTTCTCGTGGCGATGTTGGCTCAATGAAGAAGAAGATGAAGACGTTGCAACCTTGCTCTTGTGTGATTGTGTTGAGGGTTTTGAACTGCTAGTTGCGTCAATGGAGAAGGATGAACTCGCGAAGACATTGCGAATCGCAGTGGTGTTGATGATGGTGAAAGTGTGCTTTGCGGCGGCTGATGCAAGGTTGATGGTGGAAGGAGAGGATGATGGCATGACGACATGGTGCTGGCAGCGACGCTATGGTGGCAACGCGAACTGGGAAGAAGATGATGGTAAAGGCGTGCGATGA | 2436 | 0.4791 | MMYNDPQHQQHQYQQQQPPPPHFHHQQPGQEFHRGPPPSSQAPPVMRQGSASSTNLAPEFHHPGPGGPPPHYDGSILLVLPPIATYNHVHSDGHGAKRIRKLTQRKAVDYTSTVVRYMQVRMWQRDSRDRTVLQPTPAAAIDMLPAVGYPDNPSTSFAAKFVHTSLNKNRCPINRVLWTPTGRRLITGSQTGEFTLWNGQSFNFEMILQAHDQAIRSMVWSHNDNWMVSGDDGGAIKYWQNNMNNVKANKSAHKESVRDLRTDLKFCSCSDDTTVKVWDFARCQEECSLTGGKDNLVKLWDAKTGKELCSFHGHKNTVLCVKWNQNGNWVLTASKDQIIKSTNIHMYLDLQLYDIRAMKELESFRGHRKDVTALAWHPFHEEYFVSGSYDGSIFHWLVGHETPQIEISNAHDNNVWDLAWHPIGYLLCSGSSDHTTKFWCRNRPGDTLRDRFNPGMQGYADPNPIAGRVGGNFPMAEGPTTPGPFAPGLTRNEGTIPGVGVAMPLSIPSLDMPQGEQKQPHPVSMGAPPLPPGPHPSLLNANQQQPYQQNPQQMPPQHQHQGLPQQMGPLAMPPNMPQLQHPSHSPMVPHQHLPRPPPQMPIGLPGSIPGISSVPTSHPMPMPGPMGMQGAMNQMGTPMPQGPYVGMNQMHSGSLPTSGGPPLGGFPGNMPNMQGPSSANYPQGASFNRPQGGQMPLMQGYNPYQCANGGYDSCYFSWRCWLNEEEDEDVATLLLCDCVEGFELLVASMEKDELAKTLRIAVVLMMVKVCFAAADARLMVEGEDDGMTTWCWQRRYGGNANWEEDDGKGVR | 811 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian5g00118 | 811 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 289 | 310 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | MobiDBLite | consensus disorder prediction | 537 | 564 | - | - | |
| Vian5g00118 | 811 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
| Vian5g00118 | 811 | Gene3D | - | 119 | 287 | IPR015943 | GO:0005515 | |
| Vian5g00118 | 811 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 408 | 439 | - | - | |
| Vian5g00118 | 811 | MobiDBLite | consensus disorder prediction | 1 | 73 | - | - | |
| Vian5g00118 | 811 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 208 | 240 | - | - | |
| Vian5g00118 | 811 | CDD | WD40 | 170 | 439 | - | - | |
| Vian5g00118 | 811 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 364 | 396 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | SMART | WD40_4 | 304 | 343 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | SMART | WD40_4 | 357 | 397 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | SMART | WD40_4 | 243 | 279 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | SMART | WD40_4 | 201 | 240 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | SMART | WD40_4 | 154 | 198 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | SMART | WD40_4 | 400 | 440 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | Gene3D | - | 348 | 456 | IPR015943 | GO:0005515 | |
| Vian5g00118 | 811 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 166 | 198 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | SUPERFAMILY | WD40 repeat-like | 161 | 442 | IPR036322 | GO:0005515 | |
| Vian5g00118 | 811 | Gene3D | - | 288 | 346 | IPR015943 | GO:0005515 | |
| Vian5g00118 | 811 | FunFam | Flowering time control protein FY | 301 | 449 | - | - | |
| Vian5g00118 | 811 | Pfam | WD domain, G-beta repeat | 360 | 396 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | Pfam | WD domain, G-beta repeat | 410 | 439 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | Pfam | WD domain, G-beta repeat | 251 | 279 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | Pfam | WD domain, G-beta repeat | 206 | 239 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | Pfam | WD domain, G-beta repeat | 305 | 340 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | PANTHER | WD40 REPEAT PROTEIN | 290 | 705 | IPR045245 | GO:0031124 | |
| Vian5g00118 | 811 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 311 | 340 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | ProSiteProfiles | Trp-Asp (WD) repeats circular profile. | 364 | 396 | - | - | |
| Vian5g00118 | 811 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 208 | 240 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | ProSiteProfiles | Trp-Asp (WD) repeats profile. | 408 | 439 | IPR001680 | GO:0005515 | |
| Vian5g00118 | 811 | MobiDBLite | consensus disorder prediction | 491 | 592 | - | - |