Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00117 ATGGATGTTAACAATAAAGGTAAAGAAAGTGGCCTAACTTTGTTGAAAATTTGGATATGGATGGTTCTTAGAAGCAACTTCAAAGTTCAAAACAAAAGAAAACCCGACCTTCTCTCTCTGTCTCTCTCCTCACAAAAACCTTTCTCTGCAAAACCAAAACGCAGAAAACAAAACACCTCCAACGACAACACGCTACGCACAAAACGACTAATAAACACCAAAACGCAAACACTCTCCTCAAAACGACAATCCTCACAAAACAACAAAACCACCGTCCTCCACCGCCCTCCACCGTCTTCATCTTCCCATTTTCCCGTAAGAACAGTGTCGATGGCGGAGTTTGGAAACAGCCCGAATACGACGTCGTCTAGATTCTCCTTCTTCAACCGATCCATGACGACGCTGCGGAAGGAAAAGCCGTCGCAGAAGCCGCCGCAGCTGGACCGATCACTGACGAAGTTAGGAGAATCCCCTAAAGGCGGCGGGAGCGTCGTTAAGAGGCTCTGCAGCTTCTTTGAGTCGGCGAAACCTTCGTCTTCGGAACATCAACACCGCCACCACAAGCTTAAACCCTCGAAATCGATCGAAGCATCCGAATCCTCCATCGATTCTCCGGCGAAATTGGTCGATTCCTCGCCGGCGATTCGGTTACCGGGGACGGCGGATCGGATCGTGTTGTATTTCACCAGCTTACGCGGTATTAGGAGGACCTTCGAGGATTGCTACGCGGTGAGGATGATATTTCGGGGATTTAGGGTTTGGGTTGACGAGCGTGATATTTCGATGGACGCGAATTACAGAAAGGAGTTGATGAACGTGTTGGGGGAGAATGGTAACGGGAAGAGGAAGGGACACGTGGCGCTTCCTCAGGTGTTCATCAGGGGGCGGCACGTGGGGGGTGCTGACATCATCAAGTACATGTACGAGGTGGGGGAGCTCGGGAAGGTTCTGGAAGGGTTGCCAAGGACAAAGGGTGGGTTTGTGTGCGAGAGTTGTGGAGATGTGAGGTTTGCACCTTGTGGGAATTGCAGTGGGAGTAGGAAGGTGTTTGATGAGGATGAAGGGGTGTTGAAGAGGTGTTTGGAGTGTAATGAGAATGGGTTGATAAGATGTCCTAATTGTTGTTCTTCTTGA 1134 0.4974 MDVNNKGKESGLTLLKIWIWMVLRSNFKVQNKRKPDLLSLSLSSQKPFSAKPKRRKQNTSNDNTLRTKRLINTKTQTLSSKRQSSQNNKTTVLHRPPPSSSSHFPVRTVSMAEFGNSPNTTSSRFSFFNRSMTTLRKEKPSQKPPQLDRSLTKLGESPKGGGSVVKRLCSFFESAKPSSSEHQHRHHKLKPSKSIEASESSIDSPAKLVDSSPAIRLPGTADRIVLYFTSLRGIRRTFEDCYAVRMIFRGFRVWVDERDISMDANYRKELMNVLGENGNGKRKGHVALPQVFIRGRHVGGADIIKYMYEVGELGKVLEGLPRTKGGFVCESCGDVRFAPCGNCSGSRKVFDEDEGVLKRCLECNENGLIRCPNCCSS 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00117 377 MobiDBLite consensus disorder prediction 63 105 - -
Vian5g00117 377 ProSiteProfiles Glutaredoxin domain profile. 212 324 - -
Vian5g00117 377 MobiDBLite consensus disorder prediction 176 206 - -
Vian5g00117 377 CDD GRX_GRX_like 223 371 - -
Vian5g00117 377 SUPERFAMILY Thioredoxin-like 220 318 IPR036249 -
Vian5g00117 377 Gene3D Glutaredoxin 222 322 - -
Vian5g00117 377 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 140 375 - -
Vian5g00117 377 MobiDBLite consensus disorder prediction 135 161 - -
Vian5g00117 377 MobiDBLite consensus disorder prediction 45 105 - -
Vian5g00117 377 Pfam Glutaredoxin 225 298 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00117 Vian-Chr5 2219906 2252169 Dispersed/Wgd