Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00099 ATGGCTACCCTTATTGCTCCCAGCAACCACTCTGCCCAAGAAGATGCTGAAGCTCTCAGAAAGTCTTTTGAAGGATGGGGTACTGATGAGAACCTTATAATAACAATATTGGGTCATAGAACTGTTCATCAGAGGCAACAAATCAGAAGAGTTTATGAGGAAATTTATCAGGAGGATCTTGTGAAACGCTTAGAGTCTGAGATCAAAGGAGACTTTGAGAAAGCTGTGTACCGATGGATTCTTGAACCTGCAGATCGTGATGCTGTTTTGGCCAATGTTGCCATCAAGAGTGGCAAAAACTACAATGTCATTGTGGAAATTGCCACTATCTCCTCCCCAGAAGAGCTTTTGGCTGTTAGACGTGCTTATCTCCTCCGCTACAAGCACTCTTTGGAAGAAGATCTTGCAGCACATACCACTGGCCATATACGCCAGGCAATTTTTGTGGTTGATATTGAGCAGCTTCTAGTGGGGTTGGTGACCTCATTCAGGTATGTTGGTGATGAGATCAATCCAAAATTGGCACAAAGTGAGGCTGAAATTCTTCATGATGCTGTGAAAGAGAAGAAGGGTTCCTATGAAGAGGCCATCAGGGTCTTAACTACAAGGAGCAAGACTCAGCTCATTGCAACTTTCAACCGCTACAGAGAGATCCATGGCACTTCCATCTCTAAGAAACTGGTGGATGAAGGATCTAATGATTTTGAGAAGGCATTGTACACCACCATCCGTTCCATCAATGATCATTTTAAGTACTATGAAAAGGTGGTGAGAAATGCTATCAAGAAGGTTGGAACTGATGAGGATGCACTCACCCGTGTGGTTGTGAGTAGGGCTGAGAAGGATCTGAAGATAGTCTCAGAGGTTTACTACAAGAGAAACAGTGTTCTTCTTGAACATGCCATTGCCAAGGAAATTTCAGGGGATTACAAGAAGTTCCTTCTCACTCTGTTGGGGAAAGAGGACTGA 969 0.4365 MATLIAPSNHSAQEDAEALRKSFEGWGTDENLIITILGHRTVHQRQQIRRVYEEIYQEDLVKRLESEIKGDFEKAVYRWILEPADRDAVLANVAIKSGKNYNVIVEIATISSPEELLAVRRAYLLRYKHSLEEDLAAHTTGHIRQAIFVVDIEQLLVGLVTSFRYVGDEINPKLAQSEAEILHDAVKEKKGSYEEAIRVLTTRSKTQLIATFNRYREIHGTSISKKLVDEGSNDFEKALYTTIRSINDHFKYYEKVVRNAIKKVGTDEDALTRVVVSRAEKDLKIVSEVYYKRNSVLLEHAIAKEISGDYKKFLLTLLGKED 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00099 322 FunFam Annexin 249 320 - -
Vian5g00099 322 FunFam Annexin 173 247 - -
Vian5g00099 322 SUPERFAMILY Annexin 3 322 IPR037104 GO:0005509|GO:0005544
Vian5g00099 322 FunFam Annexin 1 81 - -
Vian5g00099 322 Pfam Annexin 256 317 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 Pfam Annexin 178 239 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 Pfam Annexin 90 147 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 Gene3D Annexin 173 247 IPR037104 GO:0005509|GO:0005544
Vian5g00099 322 ProSiteProfiles Annexin repeat profile. 82 161 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 PANTHER ANNEXIN 12 317 - -
Vian5g00099 322 SMART annex3 265 317 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 SMART annex3 191 242 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 SMART annex3 98 150 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 ProSitePatterns Annexin repeat signature. 265 317 IPR018252 GO:0005509|GO:0005544
Vian5g00099 322 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 ProSiteProfiles Annexin repeat profile. 173 244 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 ProSiteProfiles Annexin repeat profile. 248 319 IPR018502 GO:0005509|GO:0005544
Vian5g00099 322 Gene3D Annexin 82 150 IPR037104 GO:0005509|GO:0005544
Vian5g00099 322 Gene3D Annexin 250 322 IPR037104 GO:0005509|GO:0005544
Vian5g00099 322 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Vian5g00099 322 PRINTS Annexin family signature 261 281 IPR001464 GO:0005509|GO:0005544
Vian5g00099 322 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Vian5g00099 322 PRINTS Annexin family signature 305 318 IPR001464 GO:0005509|GO:0005544
Vian5g00099 322 Gene3D Annexin 1 81 IPR037104 GO:0005509|GO:0005544
Vian5g00099 322 FunFam Annexin 82 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00099 Vian-Chr5 1751396 1753889 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00099 5 1751396 1753889 Vian5g00099 5 1751396 1753889 ECH