Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian5g00097 | ATGGCGTCATTGAAACTGCCAGAGGTTGTTCCTTCTCCTACCCAAGACAGTGAAAGACTCAGAAAGGCTTTCCAAGGATTTGGGACAGATGAGAGAGCACTGATACTGGTATTGGGACACAGGAATGCTCAACAAAGGAAGGAAATTGCAGAAACTTATAAGCAGCTTTACAATGAATCACTGATTGATCGTCTCCATTCAGAATTGTCTGGTGATTTTAGAAATGCTATAATTCTGTGGACTTACGACCCTCCAGAAAGGCACGCAAGACTAGCAAACAGTGCATTGAAAGCTAAGAAAAAGGGGATTAAACAACTTCAGGTTCTGGTTGAAATAACATGTGCTTCAACTCCTAACCATTTGGTAGCTGTCAGGCAGGCTTATTGCTCTCTCTTTGATTCTTCACTCGAGGAAGACATTATTTCCAATGTTGCTGCACCTCTCAGAAAGCTTTTAGTGAGCCTGGTAAGCTCATACAGATATGATAAAGTTGCTGTAAATTTGGAGGTTGCCAAGTCAGAGGCATCAAAACTGCATGAAGCTATCAGCAACAAAAAATTAGATGATGATCATGTTGTGTGGACACTTAGCACCAGGAATCTTTTCCAGCTTCGGGAAACTTTTACATGCTACAACAACCTCTATGGGAATACATTGGAACAGGGCATAAAAAGTTGTGGTAGTGGTGATTTGGAAGCTCTCTTACAACTGGTAATATTGTGTATAGATTCCCCTGAGAAACATTTTGCAAAGGTTATAAGAGATTCAATTGTTGGTCTTGGAACCGATGAAGATTCACTGAGCAGAGCTATCGTAACTCGAGCAGAAGTTGACCTGTTGAAAGTAAGATTTGAATATTATACCATGTTCAAGATCAATCTTGATGATGATGTCTCAGGGGATACCTCAGGGGACTACAAAGATTTTTTGATGACTTTGTTAGGGAGAGGTCCAGAAGGAGAGTGA | 966 | 0.4079 | MASLKLPEVVPSPTQDSERLRKAFQGFGTDERALILVLGHRNAQQRKEIAETYKQLYNESLIDRLHSELSGDFRNAIILWTYDPPERHARLANSALKAKKKGIKQLQVLVEITCASTPNHLVAVRQAYCSLFDSSLEEDIISNVAAPLRKLLVSLVSSYRYDKVAVNLEVAKSEASKLHEAISNKKLDDDHVVWTLSTRNLFQLRETFTCYNNLYGNTLEQGIKSCGSGDLEALLQLVILCIDSPEKHFAKVIRDSIVGLGTDEDSLSRAIVTRAEVDLLKVRFEYYTMFKINLDDDVSGDTSGDYKDFLMTLLGRGPEGE | 321 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian5g00097 | 321 | SMART | annex3 | 28 | 80 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | SMART | annex3 | 188 | 238 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | SMART | annex3 | 107 | 155 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | SMART | annex3 | 261 | 313 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | PRINTS | Annexin family signature | 257 | 277 | IPR001464 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | PRINTS | Annexin family signature | 65 | 81 | IPR001464 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | PRINTS | Annexin family signature | 301 | 314 | IPR001464 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | PRINTS | Annexin family signature | 25 | 47 | IPR001464 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | FunFam | Annexin | 244 | 316 | - | - | |
| Vian5g00097 | 321 | PRINTS | Plant annexin signature | 122 | 136 | IPR009118 | - | |
| Vian5g00097 | 321 | PRINTS | Plant annexin signature | 164 | 184 | IPR009118 | - | |
| Vian5g00097 | 321 | PRINTS | Plant annexin signature | 229 | 247 | IPR009118 | - | |
| Vian5g00097 | 321 | ProSiteProfiles | Annexin repeat profile. | 169 | 240 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | ProSitePatterns | Annexin repeat signature. | 261 | 313 | IPR018252 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | Gene3D | Annexin | 245 | 316 | IPR037104 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | SUPERFAMILY | Annexin | 2 | 316 | IPR037104 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | ProSiteProfiles | Annexin repeat profile. | 244 | 315 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | Gene3D | Annexin | 83 | 156 | IPR037104 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | FunFam | Annexin | 83 | 156 | - | - | |
| Vian5g00097 | 321 | FunFam | Annexin | 1 | 82 | - | - | |
| Vian5g00097 | 321 | Gene3D | Annexin | 1 | 82 | IPR037104 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | Gene3D | Annexin | 168 | 243 | IPR037104 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | ProSiteProfiles | Annexin repeat profile. | 11 | 82 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | ProSiteProfiles | Annexin repeat profile. | 83 | 157 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | PANTHER | ANNEXIN | 12 | 313 | - | - | |
| Vian5g00097 | 321 | Pfam | Annexin | 249 | 313 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | Pfam | Annexin | 102 | 155 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | Pfam | Annexin | 175 | 236 | IPR018502 | GO:0005509|GO:0005544 | |
| Vian5g00097 | 321 | Pfam | Annexin | 15 | 78 | IPR018502 | GO:0005509|GO:0005544 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian5g00097 | Vian-Chr5 | 1732507 | 1735599 | Tandem |