Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00087 ATGGCCTCTCCTCCTTTTTCTTCCGCCGTTGTAAAGGATGCAAAAGTGCTTATGGTTGGTGCTGGTGGAATTGGCTGCGAGCTTCTCAAGACTCTCGCGCTCTCCGGCTTCCCTGACATCCACATCATTGACATGGACACAATAGAAGTCAGTAACCTGAATAGACAATTTTTATTTCGAAAATCTCATGTCGGGCAATCTAAAGCTAAAGTTGCTAGGGATGCTGTGTTAAAATTTAGGCCCCACATAAACATTACTCCATACCATGCAAATGTCAAAGATCCTGAATTCAATGTGGACTTCTTTAAGCAATTTAACGTTGTTCTAAATGGACTTGACAATCTAGATGCCCGCCGGCATGTGAATCGCTTGTGCCTTGCAGCTAATGTTCCATTGGTTGAAAGTGGAACTACTGGGTTCCTTGGACAGGTAACTATACATGTCAAGGGAAGAACAGAGTGCTATGAGTGTCAGCCTAAACCAGCACCCAAGACATATCCTGTCTGTACTATCACAAGTACCCCATCAAAGTTTGTTCACTGTGTTGTGTGGGCAAAGGACCTACTTTTTGCCAAGTTATTTGGGGATAAGAATCAGGGAAATGACTTGAATGTTCGATCTAGTGATGGTGCTAGCTCTTCAGAAAATGTAGAGGATGTATTTGAACGTAGGAAAGATGAAGACATTGATCAATATGGAAGGAAAATTTTCGACCATGTATTTGGGTATAACATTGAATTAGCCTTGTCTAATGATGAGACATGGAAAAATCGTAATAGACCAAAGCCTATATACAGCAAGGATGTTCTGTCTGATGAACTGGCTCAACAAAATGGAAATTTGGAGAAAAATAATGCGTGTGATGATGAATTATCAGTATCTGCCATGACATCTTTGGGTATGAAGAATCCACAGGATATTTGGAGTCTCAAAGAAAACTCGAAAATATTTCTTGAAGCATTGCAACTATTTTTTACAAAAAGGGAAAAGGAGATTGGCAATCTAGGATTTGATAAAGATGATCAGTTGGCTGTTGAATTTGTTACTGCAGCTGCAAACATACGGGCTGCTTCCTTTGGCATCCCTCTGCACAGCCTTTTTGAAGCTAAAGGTATTGCTGGTAATATTGTGCATGCTGTTGCGACTACAAATGCTGTTATTGCTGGGTTGATTGTCATTGAAGCAATCAAGGTGCTGCAAAAAGACATTGAAAGTTGTAGAATGACATATTGTCTGGAACATCCGTCAAGAAACATGCTGCTTATGCCAGTGGAGCCATTTGAACCTAACAAGTCTTGTTATGTTTGTTCTGAGACACCTTTATCCCTTGAAATAAACACCAACCGTTCTAAGTTGAAAGACTTTGTCGAAAAAATTGTTAAGGCAAAACTAGGGATGAACCTTCCTCTTATTATGTGTGCTTCAAACCTCCTTTATGAAGCTGGTGATGTTGAGGACGACATGATTGCCATTTATGAGGCTAACCTTGAAAAGGTCCTGGCTGAGCTTCCTTCTCCAGTAACTGGTGGAACAATGCTTACGGTGGAGGATATGCAACAGGAATTTGTTTGCAGTATTAACATCAAACACAGAGAGGAGTTTGATGAAGAAAAAGAACCTGATGGGATGGTTCTCTCAGGATGGACTCAACCAGTGTCAGCAACAGAAAATAAAGACAAATCTGTTGGCAATGGTGCAAGCACCTCAGATGCAGTAGTAACAGCTGTGGAATCTGAAAAGGATGAAGAAATAACTATAGTTTCAACCTTGAAGAAGCGAAAGCTTCCAGATGAGACTGACATTTCAAGTGCCACTGAAGCAAAACATCAAAAGCAGTTGGAAGTAATTGATGACGAAGACGATCTTGTCATGCTTGATGGTGATTTAGACAGCTTTAAAAAGAGAAGATTCTCATAG 1917 0.4043 MASPPFSSAVVKDAKVLMVGAGGIGCELLKTLALSGFPDIHIIDMDTIEVSNLNRQFLFRKSHVGQSKAKVARDAVLKFRPHINITPYHANVKDPEFNVDFFKQFNVVLNGLDNLDARRHVNRLCLAANVPLVESGTTGFLGQVTIHVKGRTECYECQPKPAPKTYPVCTITSTPSKFVHCVVWAKDLLFAKLFGDKNQGNDLNVRSSDGASSSENVEDVFERRKDEDIDQYGRKIFDHVFGYNIELALSNDETWKNRNRPKPIYSKDVLSDELAQQNGNLEKNNACDDELSVSAMTSLGMKNPQDIWSLKENSKIFLEALQLFFTKREKEIGNLGFDKDDQLAVEFVTAAANIRAASFGIPLHSLFEAKGIAGNIVHAVATTNAVIAGLIVIEAIKVLQKDIESCRMTYCLEHPSRNMLLMPVEPFEPNKSCYVCSETPLSLEINTNRSKLKDFVEKIVKAKLGMNLPLIMCASNLLYEAGDVEDDMIAIYEANLEKVLAELPSPVTGGTMLTVEDMQQEFVCSINIKHREEFDEEKEPDGMVLSGWTQPVSATENKDKSVGNGASTSDAVVTAVESEKDEEITIVSTLKKRKLPDETDISSATEAKHQKQLEVIDDEDDLVMLDGDLDSFKKRRFS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00087 638 Gene3D - 437 626 - -
Vian5g00087 638 Pfam ThiF family 11 434 IPR000594 -
Vian5g00087 638 FunFam SUMO-activating enzyme subunit 378 411 - -
Vian5g00087 638 FunFam SUMO-activating enzyme subunit 164 375 - -
Vian5g00087 638 FunFam SUMO-activating enzyme subunit 2 3 109 - -
Vian5g00087 638 Gene3D Ubiquitin activating enzymes (Uba3). Chain: B, domain 2 164 375 IPR023318 -
Vian5g00087 638 Pfam Ubiquitin/SUMO-activating enzyme ubiquitin-like domain 443 534 IPR028077 -
Vian5g00087 638 Gene3D - 7 109 IPR042449 -
Vian5g00087 638 PIRSF SUMO_E1B 7 620 IPR030661 GO:0016925|GO:0019948
Vian5g00087 638 Pfam Ubiquitin-activating enzyme, SCCH domain 305 370 IPR019572 -
Vian5g00087 638 CDD Uba2_SUMO 15 436 - -
Vian5g00087 638 FunFam SUMO-activating enzyme subunit 437 585 - -
Vian5g00087 638 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 12 483 IPR035985 GO:0008641
Vian5g00087 638 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 12 487 IPR045886 -
Vian5g00087 638 FunFam SUMO-activating enzyme subunit 2 10 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00087 Vian-Chr5 1541344 1548481 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00087 5 1541344 1548481 Vian5g00087 5 1541344 1548481 ECH