Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00081 ATGAGTAATGTTCAAGAAAATGATACACTGAACACTCTTTATGAGGTTTCATTGAGAGGTAGTGTTTCTGAGTTAGAAACTCTGATTGGAAGAGACCCTCTTATCCTTCACAGAATTTCCTTAACAGCATTCACTGAAACTCCTTTGCACATATCAGCTTTACTTGGTCATCTTGATTTCACAAAGTCCCTTCTGACTCACAGACCTCAACTTGCTCTTGAGACTGACCACTGCAAACGCACCCCTCTTCATCTGGCTTCTGCTGAAGGCCATGTAGAGATTGTTCATGTTTTGCTGCAGACATGTGAAGATGCATGCTTGATGAGTGACCAAGATGGAAGGATTCCTCTTCATTATGCAGCTATGAGAGGAAGAACGGAGGTTGCAAGACAGTTGATCAGTGGAGCAAAGTCAGAATCTGTGATGGTGTTTGATGGATCAGGAAAAACTATGTTTCACCTTTGTGTTGAGCACAATCACTTGGAGACTTTGAAAACACTGGTGGAAGTTGGAAATGTCACGGAGGATTTTCTAAACTGTGGAGACTTTCATCATGGAAATACCATTCTCCATTTGGCTGTTATGTTCAAGCAACTTGAGAGTGTAAGGTACTTGCTCTCAATATCCAAAATAAAAGAAGAAGCAAATATTGAGAACAAGATGGGTTACACTGCTTTGGACATGCTAGAGCATGTTCCAAAAGACATGAGAAGTCTTCAAATAAAACTCATGCTGATGGATGCTGGATTCAAGAACAATGAAAATAACCAAGTTCATCATCCACCATCTGCATCAATCATAGATGTTCCTCCATCAAGGACAATAAATCCAAATGAAAAGTTTTGGAGTTTGAAGCGTGTGAACAAGGTCTTAAACCTTAAAAGTGGTAGGTTGGAAGAAATGAGAGGCATGTTGAGTTTGGTGTCTACAATGATCTCAACCGTGACCTTTGGTGTTGTGATCAATCCACCAGGTGGTGATGATCATTGGTTATCTGTAGAAGATAGAAAAATGTTCATAAGTTTGTTAACTATGAACACAATCTCTTTCATTGCATCACTCGGTGTCACTCTTTTACTTATAAGTGGAGTTCCCTTAAAGAATGAAGTCACAATGGGGCTCTTATCAGTAGGCACATGTGTCTGTCTCACATTTCTTGTGCTTACTTACATAAATGCTGTGCAATTGAACAAAAATTTGCATTTTGGGGACACATTTTCTGTGATGTTTTCTTGGTTTGTACTTGTTGGGACAATAGTTGTGTTTACCATAATTCGTGTAATTTCTAAGCTAGCGAAAGTTCTGTAG 1308 0.3922 MSNVQENDTLNTLYEVSLRGSVSELETLIGRDPLILHRISLTAFTETPLHISALLGHLDFTKSLLTHRPQLALETDHCKRTPLHLASAEGHVEIVHVLLQTCEDACLMSDQDGRIPLHYAAMRGRTEVARQLISGAKSESVMVFDGSGKTMFHLCVEHNHLETLKTLVEVGNVTEDFLNCGDFHHGNTILHLAVMFKQLESVRYLLSISKIKEEANIENKMGYTALDMLEHVPKDMRSLQIKLMLMDAGFKNNENNQVHHPPSASIIDVPPSRTINPNEKFWSLKRVNKVLNLKSGRLEEMRGMLSLVSTMISTVTFGVVINPPGGDDHWLSVEDRKMFISLLTMNTISFIASLGVTLLLISGVPLKNEVTMGLLSVGTCVCLTFLVLTYINAVQLNKNLHFGDTFSVMFSWFVLVGTIVVFTIIRVISKLAKVL 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00081 435 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 10 431 - -
Vian5g00081 435 ProSiteProfiles Ankyrin repeat profile. 112 134 IPR002110 GO:0005515
Vian5g00081 435 ProSiteProfiles Ankyrin repeat region circular profile. 112 134 - -
Vian5g00081 435 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Vian5g00081 435 SMART ANK_2a 78 107 IPR002110 GO:0005515
Vian5g00081 435 SMART ANK_2a 147 175 IPR002110 GO:0005515
Vian5g00081 435 SMART ANK_2a 112 143 IPR002110 GO:0005515
Vian5g00081 435 SMART ANK_2a 44 73 IPR002110 GO:0005515
Vian5g00081 435 SMART ANK_2a 185 214 IPR002110 GO:0005515
Vian5g00081 435 SUPERFAMILY Ankyrin repeat 13 229 IPR036770 -
Vian5g00081 435 ProSiteProfiles Ankyrin repeat region circular profile. 185 207 - -
Vian5g00081 435 ProSiteProfiles Ankyrin repeat profile. 185 207 IPR002110 GO:0005515
Vian5g00081 435 Pfam Ankyrin repeats (3 copies) 37 100 IPR002110 GO:0005515
Vian5g00081 435 Pfam Ankyrin repeats (3 copies) 112 171 IPR002110 GO:0005515
Vian5g00081 435 Gene3D - 19 138 IPR036770 -
Vian5g00081 435 Pfam Domain of unknown function 297 393 IPR026961 -
Vian5g00081 435 ProSiteProfiles Ankyrin repeat region circular profile. 78 100 - -
Vian5g00081 435 Gene3D - 139 233 IPR036770 -
Vian5g00081 435 Pfam Ankyrin repeat 185 206 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00081 Vian-Chr5 1472399 1474481 Dispersed