Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00070 ATGGAGAACAACAATGGCAATTCTCAAGAACTTAGCAACAACAAACGAGGAATTCCATTCATGGTTTTCTTCAAAGACGCAAGACATATTTTGAAGCTGGATTCCCTCTCTAGAGAGATATTAGGGATTGCATTCCCTGCTGCTCTTGCTGTTGTTGCTGATCCCATTGCTTCTTTGATAGACACAACATTCATAGGCCACTTGGGACCACTTGAACTTGCTGCTGCAGGAGTTTCCATTGCTGTGTTCAACCAAGCTTCAAGAATTACAATTTTTCCTCTCGTTAGTATCACAACTTCCTTTGTGGCTGAGGAAGATACCATCAAAAGCTTGGCCACCACACAGACAGAAAATGATAACACTAAGCTAGACAGACCAATTGTGTCTAAGGATCATATGCTTCCACAAACAGATAACGTTGATACTCCAAAAGAATTAACAGATGAATCAAACAATGTTGAAACAAAGAGTTCTAATGTGGAACAAGTTGGCACAGGAAACATGGACATGAATAATGGAAATGAAAACGTTATGAGTAAGAGGAAGAAAAAAGTTGGCAAGAAGGTTATTGCTTCAGCATCAACAGCCTTAATTTTTGGAACAATCCTTGGCCTCCTTCAAACTGCAATCCTTTCATTTGCAGCCAAACCTCTTCTGTATGCAATGGGTCTAAAACATGTACATTATGGCAACCACCCTCCTTATATTGTTAATGAAAAGAGTGCACCTCCTACCTCCAAGCATGAAGGATTTGCAGATTTTCAGATTTCTCAAAAATGGGTAGTTTCAGTGACATTTTGTATGACCTTAGCATCATCACTGGCAGCAAGGCTTGGTTCCATTCCCATGGCTGCCTTTCAACCAGGCCTTCAGATCTGGTTGGCATCATCCCTTCTTGCTGATGGTTTAGCAGTTGCAGTACAGACAATTCTTGCTTGTTCCTTTGCTGAAAAAGACTACCACAAAGCTACTGCTGCTGCAACAAGGACCCTACAAATGACTTTTCTTTTGGGATTTGGACTCTCTCTCGCAGTTGCTCTTGGATTATTCTTTGGAGCTCCAATCTTTTCCAAAAATGCTACTGTTGTGCAATTAATCAAAATTAGCATGCCGGTATGCATCCTTTATAACACCAAATCAACCTCAAAGGAAAATTTATTGCATGCTAGGATAGCACGTGATGTGTTTGTTGCAGCTACTCAACCAATTAATTCATTGGCCTTTGTCTTTGACGGTGTCAATTATGGGGCTTCAGATTTTGCTTATTCTGCTTATTCTTTGGCAAGTTTTGGTGTCATTAGTGAGTATTCCTATAGAAATCTTTCTCTTCAGAAGCAAACAATTTATTGGAATATGGATTGCATTAAGTATATACATGATTCTTCGTATGGTAGTTGGTATATGGAGGATGGGAACTGGAACAGGACCATGGTACTATCTTAG 1443 0.3985 MENNNGNSQELSNNKRGIPFMVFFKDARHILKLDSLSREILGIAFPAALAVVADPIASLIDTTFIGHLGPLELAAAGVSIAVFNQASRITIFPLVSITTSFVAEEDTIKSLATTQTENDNTKLDRPIVSKDHMLPQTDNVDTPKELTDESNNVETKSSNVEQVGTGNMDMNNGNENVMSKRKKKVGKKVIASASTALIFGTILGLLQTAILSFAAKPLLYAMGLKHVHYGNHPPYIVNEKSAPPTSKHEGFADFQISQKWVVSVTFCMTLASSLAARLGSIPMAAFQPGLQIWLASSLLADGLAVAVQTILACSFAEKDYHKATAAATRTLQMTFLLGFGLSLAVALGLFFGAPIFSKNATVVQLIKISMPVCILYNTKSTSKENLLHARIARDVFVAATQPINSLAFVFDGVNYGASDFAYSAYSLASFGVISEYSYRNLSLQKQTIYWNMDCIKYIHDSSYGSWYMEDGNWNRTMVLS 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00070 480 MobiDBLite consensus disorder prediction 132 175 - -
Vian5g00070 480 Pfam MatE 263 375 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vian5g00070 480 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 7 225 IPR044644 -
Vian5g00070 480 MobiDBLite consensus disorder prediction 152 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00070 Vian-Chr5 1261715 1267787 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian11g00353 11 3335962 3339673 Vian5g00070 5 1261715 1267787 ECH
Vian5g00070 5 1261715 1267787 Vian5g00070 5 1261715 1267787 ECH