Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00043 ATGAGAACTGCAAGCTGTTCCCTCATAGTGTTCTTTATTCTGCTGGTTGAGTCAGTGAATTCTCTCAACCGTAGCAGTTTTCCTGTGAATTTCTTATTTGGGGTTGCCTCTTCTTCTTACCAGATTTCTCAAAAAGGACAAATTGGGATAACGTTGAACTCTCCATGGATAATGCCACTTTCCCAGTCAAAAGAAGACATCAATGCTGCATTCAGGGCCATTGTTTTCTTGTATGACTGGAAAGGAAAACCCAGTGGAGAATCCAAATTCAAATCAAACTGGTTTATGGAGGCACTAAATTCTGGATCATACCCTGTTGAAATGGTTAATAACATTGGTGAAAGATTGCCAAAATTTTCAATGGAACAGTCGTTGATGGCCAAAGGATCCTTTGATTTCTTAGGACTTAACTACTACACTGCAGCTTATGCAGCCAATGCTGCCTCAAACTGGTTATACATTTATCCTAGAGGAATTCAGGATCTTTTACTCTACACAAAGGAAAAGTTTAACAATCCAGTCATATACATAACAGAGAATGGAGTTGATGAAGTGAATGACAATGCAAAATCACTTGAGGACAATATGAGAATAGACTACATCAGTAACCATCTTGCTTATGTTCAGAGTGCCATAGAAAATGGTGTCAATGTCAAAGGCTACTTTGCATGGTCATTGTTGGACAATTTTGAATGGGCAGATGGTTTTTCTGTTAGATTTGGAATCATTTATGTTGATTTTAAGGATGGATTGAGCAGATATCCTAAGAAATCAGCTCAGTGGTTCAAAAAGTTTCTACATTGA 804 0.3781 MRTASCSLIVFFILLVESVNSLNRSSFPVNFLFGVASSSYQISQKGQIGITLNSPWIMPLSQSKEDINAAFRAIVFLYDWKGKPSGESKFKSNWFMEALNSGSYPVEMVNNIGERLPKFSMEQSLMAKGSFDFLGLNYYTAAYAANAASNWLYIYPRGIQDLLLYTKEKFNNPVIYITENGVDEVNDNAKSLEDNMRIDYISNHLAYVQSAIENGVNVKGYFAWSLLDNFEWADGFSVRFGIIYVDFKDGLSRYPKKSAQWFKKFLH 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00043 267 PRINTS Glycosyl hydrolase family 1 signature 130 144 IPR001360 GO:0004553|GO:0005975
Vian5g00043 267 PRINTS Glycosyl hydrolase family 1 signature 215 232 IPR001360 GO:0004553|GO:0005975
Vian5g00043 267 PRINTS Glycosyl hydrolase family 1 signature 175 183 IPR001360 GO:0004553|GO:0005975
Vian5g00043 267 PRINTS Glycosyl hydrolase family 1 signature 194 205 IPR001360 GO:0004553|GO:0005975
Vian5g00043 267 PRINTS Glycosyl hydrolase family 1 signature 239 251 IPR001360 GO:0004553|GO:0005975
Vian5g00043 267 Gene3D Glycosidases 42 147 - -
Vian5g00043 267 Gene3D Glycosidases 148 267 - -
Vian5g00043 267 PANTHER GLYCOSYL HYDROLASE 38 266 IPR001360 GO:0004553|GO:0005975
Vian5g00043 267 Pfam Glycosyl hydrolase family 1 146 265 IPR001360 GO:0004553|GO:0005975
Vian5g00043 267 SUPERFAMILY (Trans)glycosidases 43 266 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00043 Vian-Chr5 688332 691987 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00043 5 688332 691987 Vian5g00043 5 688332 691987 ECH