Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian5g00041 ATGGACTACGAACCCTACGACAGTAGCGGAACTGATGATGATCTTCCACCAACCCATCAAAATAGAATTTCCAGGGGAGGAGGTGGAGGAGGAGGAGGTGGGGGACGTCTTGCCGGGAATGGAAGATCTGCTGTTGGTTCAATTCCGTACCCTAGGATGTATGGGGAAATTGATATGGAGACCCAGATTCATCAGCTTGAGCAAGAAGCTTACAGTTCAGTTCTAAGAGCCTTTAAAGCTCAAGCTGATGCCATTACTTGGGAGAAAGAAAGTTTAATTACAGAGCTGAGGAAAGAGCTGAGATTGTCGAATGAGGAGCACAGAGAACTTCTTGGTCGAGTTAACGCCGATGATGTGATCCGGAGGATAAGGGAGTGGAGACAGACAGGAGGCCATCAGCCTGGTGTACTTAATACTGGTCAAGGTCTTCATGACTCGGTTCCCAGTCCCACAGTCTCTGCTTCTCGCAAGAAGCAGAAGATTACACCATCTGTACCATCACGATCTTTCGCCGGGCCTTCTCCCCCGTTTCACCCCCAAACAGTGAGTGCACCCCACCAACCATCTTCCTCTGCAGCAAAACGAGGATCTGTTCCTGGATCAAAGGGGAAAAAACACAAACCAGGTCAAATATTACCTGGTGTCTCTTCGATGAAGCAGTATCCTTCCACTGGACCAGGTGGAAGGACTCAAGTGCCTAATAGAGCTGTCACGGGTGAGCATGCAGAGGGAGCATCATTTGACTCTTTGGTTGGTAGGAGAGTGCGGACAAGATGGCCTGATGATAATAACTTTTATGAAGCTGTTATCACAAACTACAATCCGGCTGATGGACGCCATAATCTGGTCTATGACATGGGGAGTGCAAATGAAACATGGGAATGGGTTAATCTTTCAGAGATATCTCCTGAAGATATTCAGTGGGTTGGTGAGGATCCAGGAATCAATCATCGTGGGGGTTTTGGGGGCTCTGGTCATGGGATGAATAGGTCTGTTGGACGGGATGGTGTTCCTGGAGGTGGAAGAGGCAGGGGAGCTACAAAAGGGCAATCCAGAAAAGATTTTTTGTCATCTCAAAATGGCATAGGAAAGAAGGCGCCTGATGATATACAAATACTTCACACAGACACACTAATCAAGGAGGTGGAGAGGGTATTCAGTGCAAATCATCCCGATCCCCTTGAAATTGAGAAAGCAAAGAAGGTATTGAAGGATCATGAACAGGCTCTTATTGATGCAATTGCAAGACTCAATGATCTTTCTGATGGTGAAAGTGATGGGGCTGGCCATCATTTCTCACATGCTCAATCAATGGATCGAGAGTGA 1326 0.4721 MDYEPYDSSGTDDDLPPTHQNRISRGGGGGGGGGGRLAGNGRSAVGSIPYPRMYGEIDMETQIHQLEQEAYSSVLRAFKAQADAITWEKESLITELRKELRLSNEEHRELLGRVNADDVIRRIREWRQTGGHQPGVLNTGQGLHDSVPSPTVSASRKKQKITPSVPSRSFAGPSPPFHPQTVSAPHQPSSSAAKRGSVPGSKGKKHKPGQILPGVSSMKQYPSTGPGGRTQVPNRAVTGEHAEGASFDSLVGRRVRTRWPDDNNFYEAVITNYNPADGRHNLVYDMGSANETWEWVNLSEISPEDIQWVGEDPGINHRGGFGGSGHGMNRSVGRDGVPGGGRGRGATKGQSRKDFLSSQNGIGKKAPDDIQILHTDTLIKEVERVFSANHPDPLEIEKAKKVLKDHEQALIDAIARLNDLSDGESDGAGHHFSHAQSMDRE 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian5g00041 441 MobiDBLite consensus disorder prediction 216 231 - -
Vian5g00041 441 Coils Coil 93 113 - -
Vian5g00041 441 CDD Tudor_Agenet_AtEML-like 251 301 - -
Vian5g00041 441 SMART ENT_2 59 132 IPR005491 -
Vian5g00041 441 ProSiteProfiles EMSY N-terminal (ENT) domain profile. 59 146 IPR005491 -
Vian5g00041 441 MobiDBLite consensus disorder prediction 423 441 - -
Vian5g00041 441 Gene3D ENT domain 54 165 IPR036142 -
Vian5g00041 441 Gene3D - 244 295 - -
Vian5g00041 441 MobiDBLite consensus disorder prediction 1 44 - -
Vian5g00041 441 Pfam ENT domain 61 128 IPR005491 -
Vian5g00041 441 SUPERFAMILY Tudor/PWWP/MBT 249 289 - -
Vian5g00041 441 MobiDBLite consensus disorder prediction 320 368 - -
Vian5g00041 441 FunFam Protein EMSY-LIKE 3 isoform A 54 184 - -
Vian5g00041 441 MobiDBLite consensus disorder prediction 132 168 - -
Vian5g00041 441 SUPERFAMILY ENT-like 54 171 IPR036142 -
Vian5g00041 441 FunFam Protein EMSY-LIKE 3 249 301 - -
Vian5g00041 441 MobiDBLite consensus disorder prediction 422 441 - -
Vian5g00041 441 Coils Coil 396 416 - -
Vian5g00041 441 PANTHER PROTEIN EMSY-LIKE 4 11 426 IPR033485 GO:0050832
Vian5g00041 441 MobiDBLite consensus disorder prediction 130 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian5g00041 Vian-Chr5 667795 674560 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian5g00041 5 667795 674560 Vian5g00041 5 667795 674560 ECH